|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G08550 | AT | Annotation by Michelle Graham. TAIR10: elongation defective 1 protein / ELD1 protein | chr3:2596513-2599515 FORWARD LENGTH=533 | SoyBase | E_val: 0 | ISS |
GO:0006084 | GO-bp | Annotation by Michelle Graham. GO Biological Process: acetyl-CoA metabolic process | SoyBase | N/A | ISS |
GO:0009663 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plasmodesma organization | SoyBase | N/A | ISS |
GO:0009737 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus | SoyBase | N/A | ISS |
GO:0009744 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to sucrose stimulus | SoyBase | N/A | ISS |
GO:0009749 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to glucose stimulus | SoyBase | N/A | ISS |
GO:0009750 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus | SoyBase | N/A | ISS |
GO:0009826 | GO-bp | Annotation by Michelle Graham. GO Biological Process: unidimensional cell growth | SoyBase | N/A | ISS |
GO:0009831 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plant-type cell wall modification involved in multidimensional cell growth | SoyBase | N/A | ISS |
GO:0016126 | GO-bp | Annotation by Michelle Graham. GO Biological Process: sterol biosynthetic process | SoyBase | N/A | ISS |
GO:0016132 | GO-bp | Annotation by Michelle Graham. GO Biological Process: brassinosteroid biosynthetic process | SoyBase | N/A | ISS |
GO:0030244 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process | SoyBase | N/A | ISS |
GO:0048193 | GO-bp | Annotation by Michelle Graham. GO Biological Process: Golgi vesicle transport | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005768 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: endosome | SoyBase | N/A | ISS |
GO:0005794 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus | SoyBase | N/A | ISS |
GO:0005802 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0009543 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast thylakoid lumen | SoyBase | N/A | ISS |
GO:0016757 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups | SoyBase | N/A | ISS |
PTHR10774 | Panther | CALCIUM-DEPENDENT LIPID-BINDING PROTEIN (CALB RELATED) | JGI | ISS | |
PTHR10774:SF5 | Panther | CALCIUM LIPID BINDING PROTEIN | JGI | ISS | |
UniRef100_G7J1N7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: SDL-1 protein n=1 Tax=Medicago truncatula RepID=G7J1N7_MEDTR | SoyBase | E_val: 0 | ISS |
UniRef100_I1JWF3 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JWF3_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma04g26230 not represented in the dataset |
Glyma04g26230 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma04g26230.1 sequence type=CDS gene model=Glyma04g26230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCCCATCCCCAACCACCAGCTCTACTCTCCTTTCCGTACAACCCTATCTTCCTCTTCCTCCTCCTCTTCCCATTCCTTCACCTCGAAGATCCTTCTCCTCCTGACCATCCTCCCGGTGTCTTTGGCAGCCATAGCGTTCATCCTCCAATGGCGCGGCGGCATCACCGATCCGGCCACCCTCTCGTCGCCGCGTGGGTCCCACCACTACTTCCCCGGCATGGAGCCCTCTCCCCTCTCCCATGTCTCCCATAATTCTCACTCCCATTCTGACTGCGTCAATCTTGGCCGCACTAATTCTCCTTCCTTCCCTTACTACCACAACTGGAAGCTTGACTTTGAGGCCTCTCTCACCCCTAAGATCTGTGTTACAACTAGTACATCAGCAGGGCTTGAGCAGATTCTACCTTGGATGTTTTATCATAAAGTCATTGGGAAGGCTGCTTCTCCTGAAGTATCAAATGTCCTAGAATCAATTCCTGGTGTTAAGGTTGTATATAGAACAAAACAGCTGGAAGAACAACAGGCTAAGAGCCGTATTTGGAATGAGACATGGCTGGCAGGTTTCTTTTATAAACCCTGCAATTATGAACTTTTTGTGAAGCAATCTCTCAACATGGAGATGGCTATTGTTATGGCAAGGGATTCTGGCATGAACTGGATTCTTCATCTTGATACAGATGAATTAATGCACCCAGCTGGTGCTCGGGAATATTCTTTAAGGCAGTTGCTCCTTGATGTTCCAGGACATGTTGATATGGTCATATTTCCTAACTATGAGAGCAGTATCGAGCGAGATGATATCAAAGAACCTTTTAGTGAGGTATCGATGTTTAAAAAGAATTATGACCATCTTCCAAAGGATACATACTTTGGCATGTATAAAGATTCTGTACGTGGCAATCCAAACTACTTCCTGACTTACGGAAATGGAAAATCAGCTGCTCGGATACAAGATCATCTTCGGCCTAATGGTGCACATAGATGGCATAATTATATGAAAACCCCAAATGAAATCAAATTGGAAGAGGCTGCTGTTTTGCATTACACATATGCTAAATTCTCAGACTTAACTTCTAGACGTGACCGCTGTGGTTGCAAACCTACAAAAGAAGATGTCAAAAGATGCTTCATGTTGGAATTTGACAGAACTGCATTTATCATTGCTTCAACTGCAACTGAAGAAGAAATGATGAAGTGGTATAATGAACATGTTGTGTGGGGTGATAAAGACCTGAAGATGAAACTTTTGAGGAAGGGAGTATTGACTCGTATATATTCTCCCATGGTCATAATTCAAAGTTTAAGGGAATCTGGAGTCTTTAGTTCTGTCATTGCATCTGCCCCATCACTTTCTAAAGAAAACTTTCTGCTGTCAATTGATAGTAGTAATTCTTCAAGAGTCTCTGCCTCTGTAACCCTCCCTTCTAGAAAGGTTGGAAGGACCAAAGAATCTCAAGCAGCTACACGGAAGGCTCTGTCTGTTGAATCTGCTGCATTTCACGAAGTGGCTGTACCACCACTGTCTCCCCCAGTAGTAGATGACAATGACCTCATTTCACATAATTGA
>Glyma04g26230.1 sequence type=predicted peptide gene model=Glyma04g26230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MPIPNHQLYSPFRTTLSSSSSSSSHSFTSKILLLLTILPVSLAAIAFILQWRGGITDPATLSSPRGSHHYFPGMEPSPLSHVSHNSHSHSDCVNLGRTNSPSFPYYHNWKLDFEASLTPKICVTTSTSAGLEQILPWMFYHKVIGKAASPEVSNVLESIPGVKVVYRTKQLEEQQAKSRIWNETWLAGFFYKPCNYELFVKQSLNMEMAIVMARDSGMNWILHLDTDELMHPAGAREYSLRQLLLDVPGHVDMVIFPNYESSIERDDIKEPFSEVSMFKKNYDHLPKDTYFGMYKDSVRGNPNYFLTYGNGKSAARIQDHLRPNGAHRWHNYMKTPNEIKLEEAAVLHYTYAKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRTAFIIASTATEEEMMKWYNEHVVWGDKDLKMKLLRKGVLTRIYSPMVIIQSLRESGVFSSVIASAPSLSKENFLLSIDSSNSSRVSASVTLPSRKVGRTKESQAATRKALSVESAAFHEVAVPPLSPPVVDDNDLISHN*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||