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Report for Sequence Feature Glyma04g22820

Feature Type:gene_model
Chromosome:Gm04
Start:26128229
stop:26137563
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma04g22820
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
UniRef100_UPI000233951EUniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233951E related cluster n=1 Tax=unknown RepID=UPI000233951E SoyBaseE_val: 4.00E-107ISS

Expression Patterns of Glyma04g22820
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g22820 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.04g153100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma04g22820
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma04g22820
>Glyma04g22820.1   sequence type=CDS   gene model=Glyma04g22820   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCCCTCAGTGGCATTTTTGTAAATAACGGTTTTGCACACATTCTGCACGACGCTGCGAAGCTCAAAACCTCGAAGGACCTTGAAGCGAACATCCCCCGTGCCATATCAACGTTGTCGCAGTACCGCCTTGCCGTAGGCTGCCCCGCTGTGGTTGTCAGCTGTGTCGTGGTTGGCTGTTTGGTGTTGACGTCAATTGTAGTGTCGTGCGCGCCCCGCTGTGCCCTGCTGTGGAAGGGTTTGATTAATTTAGAGAGATGGGTGGGAGCAAGAAGAGGAAGAGAAACGAAGAGCAGAGAGGAGGCACGATGTATTAAAAAAACCCACCGGACTGCTCTTTTGGCTTCTCTCCACCCTGAATTCCACCCCTTTTCCTTCAATTCTTGCATCCTCACTCACGCGCGTCTTGCTCTATCATCGCCACGCTCTCAACTGGCTACAACTACCATTAAACCCATACAAGTTGAAGTGTGA
Predicted protein sequences of Glyma04g22820
>Glyma04g22820.1   sequence type=predicted peptide   gene model=Glyma04g22820   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSLSGIFVNNGFAHILHDAAKLKTSKDLEANIPRAISTLSQYRLAVGCPAVVVSCVVVGCLVLTSIVVSCAPRCALLWKGLINLERWVGARRGRETKSREEARCIKKTHRTALLASLHPEFHPFSFNSCILTHARLALSSPRSQLATTTIKPIQVEV*






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