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Report for Sequence Feature Glyma04g22801

Feature Type:gene_model
Chromosome:Gm04
Start:26121055
stop:26123765
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma04g22801
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25590AT Annotation by Michelle Graham. TAIR10: unknown protein; Has 149 Blast hits to 140 proteins in 44 species: Archae - 0; Bacteria - 6; Metazoa - 40; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr3:9302271-9303542 FORWARD LENGTH=423 SoyBaseE_val: 5.00E-45ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_G7ZY60UniRef Annotation by Michelle Graham. Most informative UniRef hit: Acylamino-acid-releasing enzyme n=1 Tax=Medicago truncatula RepID=G7ZY60_MEDTR SoyBaseE_val: 5.00E-16ISS
UniRef100_I1JEQ0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JEQ0_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma04g22801
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma04g22801 not represented in the dataset
Glyma04g22801 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g22801 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.04g152800 Wm82.a2.v1IGC As supplied by JGI

References for Glyma04g22801
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma04g22801
>Glyma04g22801.1   sequence type=CDS   gene model=Glyma04g22801   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGGAGAGGAACAAAGGTGTGGAAGATCAGTCTTACACCAATGACATGGATTGCTACTACTACTCCACCTCTGAATTCACACCATGTAAGAAACACCCTTCTTCTTCTTCTTCTTCTGTTGGTATATGTGCTTATTGTCTCAAGGACCGTTTGGTCAAGCTTGTGTGTTCTGATTGTGGGGAGCAAAGGCTTTCTTCATGTCCTTGCTCTGATGAGATGGCCTCTTCGCACCGCAACTCATGCACTGTTGAGGTGGGGAGTGTTGGGAGGGTCTCATTCCTCATTGAGAATGAGAATAACAATGAGAGTACCCCAGTGGTTCTTCAGCGTTTGAATCACAATAACAAGGCCGAGGAGGATAATAATAATGACGAGGATGAGGTTGTGGTGCTGAGGAGGAGCAGCAGCAGCTGTGTTGAGATCAAGAGGCATCATCATGGTGGTGATGGGTTTTGGAGAATTGGGAAGCTTTTTCGGAAGAAAAAGGATCAGAAGGGTTGTCGCAGAAGTGTTGTTGGGTTTGACGAGAGGAATAGTGAGATGTGGGTGGTGGATCATCAAGGGGGGGTGTCTAGGTCAAGGTCACTATGCAGCTTCAGGGGTGGAGGGCTATTTGGATCTGAGGATGGTGGTGATTCAGTGTTGTCAGGTGCTAGAAGCTCAATTTCTGCAGCTAGGAGTTCTGGTGTTAATATGTTGGAATCTGGAAGAAGAAGTGGATACAGTGAAGCTGAGCCAAGAAGGAGTGGTTTTGATGGAGTAGAGAGGAGGGATTTCTTGTTTGATAGTTATGAAAGTGGAAATGATCTCAAAGGTGGTGTGAAAAAGGGTGGACTAATGGATGGTGGTGGAGATGGTGGTGGATTCTACGGTGGGGTAAATAGGCGTGTGTTTTCACTCAGAGAGAGTGATTTCAAAGGCATGGATGAGTCAAGCTTTATTGACTTGAAGCTTGATTACTCATCAGAATCAAAGCACGAGTTTTCTGCTGCAAAGATGAGCAACAATATGGGGGGTGATACTTTCTCTTCTTTCAGAAATGGGAATTTCATGCCACATGATGTTGGTGGAGGTTCTTATGGAGGGTTGGTAGGGGATGGAGTTTTAACCAATGGAGGGTCATGTAGACTCACTGTGAATGACAGAGGAATCAAGAGGGGAAGGAAAAGCATGAAGGGTTGGAGGTGGATTTTCAGATACCATTCAAATTGGGGAAGCTCAAGGAAAAGAGATGAAGACTTTATGTTCAAAGCATGA
Predicted protein sequences of Glyma04g22801
>Glyma04g22801.1   sequence type=predicted peptide   gene model=Glyma04g22801   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRERNKGVEDQSYTNDMDCYYYSTSEFTPCKKHPSSSSSSVGICAYCLKDRLVKLVCSDCGEQRLSSCPCSDEMASSHRNSCTVEVGSVGRVSFLIENENNNESTPVVLQRLNHNNKAEEDNNNDEDEVVVLRRSSSSCVEIKRHHHGGDGFWRIGKLFRKKKDQKGCRRSVVGFDERNSEMWVVDHQGGVSRSRSLCSFRGGGLFGSEDGGDSVLSGARSSISAARSSGVNMLESGRRSGYSEAEPRRSGFDGVERRDFLFDSYESGNDLKGGVKKGGLMDGGGDGGGFYGGVNRRVFSLRESDFKGMDESSFIDLKLDYSSESKHEFSAAKMSNNMGGDTFSSFRNGNFMPHDVGGGSYGGLVGDGVLTNGGSCRLTVNDRGIKRGRKSMKGWRWIFRYHSNWGSSRKRDEDFMFKA*






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