Glyma04g18661 - SoyBase

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Report for Sequence Feature Glyma04g18661

Feature Type:	gene_model
Chromosome:	Gm04
Start:	20250785
stop:	20251127
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma04g18661

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G43650	AT	Annotation by Michelle Graham. TAIR10: nodulin MtN21 /EamA-like transporter family protein \| chr1:16443861-16446814 REVERSE LENGTH=343	SoyBase	E_val: 5.00E-14	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
UniRef100_G7KHQ6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Auxin-induced protein 5NG4 n=1 Tax=Medicago truncatula RepID=G7KHQ6_MEDTR	SoyBase	E_val: 2.00E-20	ISS
UniRef100_UPI000233AA7B	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233AA7B related cluster n=1 Tax=unknown RepID=UPI000233AA7B	SoyBase	E_val: 3.00E-37	ISS

Expression Patterns of Glyma04g18661

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma04g18661 not represented in the dataset	Glyma04g18661 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g18661 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma04g18661

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma04g18661

Limit To All Plant Sequences

>Glyma04g18661.1   sequence type=CDS   gene model=Glyma04g18661   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTCACCCCTCTAGCTCTTATAATCACAACAATATTCTTAGCACTTTTGTGGAAAGAAACACTTTACTTGGGAAGTGTTGGTGGCACTGTTTTACTAGTGGTTGGACTCTACATTGTCCTTTGGGGGAAGAGCAAGGAGAGTGTAAAGGAGGGTGTAAAAGGAGATAACCTAGAAGTTGAAGAAACAAAAGAGGAAACCAGATTGGAGTGCATTGTACAACATTGA

Predicted protein sequences of Glyma04g18661

Limit To All Plant Sequences

>Glyma04g18661.1   sequence type=predicted peptide   gene model=Glyma04g18661   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFTPLALIITTIFLALLWKETLYLGSVGGTVLLVVGLYIVLWGKSKESVKEGVKGDNLEVEETKEETRLECIVQH*

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