Glyma04g15361 - SoyBase

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Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma04g15361

Feature Type:	gene_model
Chromosome:	Gm04
Start:	16011459
stop:	16017065
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma04g15361

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G12930	AT	Annotation by Michelle Graham. TAIR10: ARM repeat superfamily protein \| chr1:4398588-4405495 REVERSE LENGTH=1005	SoyBase	E_val: 1.00E-52	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005575	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cellular component	SoyBase	N/A	ISS
PTHR12363	Panther	NUCLEAR TRANSPORT PROTEIN	JGI		ISS
PTHR12363:SF4	Panther	gb def: cg7212 gene product [drosophila melanogaster]	JGI		ISS
UniRef100_G7KYC8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Transportin-3 n=1 Tax=Medicago truncatula RepID=G7KYC8_MEDTR	SoyBase	E_val: 1.00E-70	ISS
UniRef100_I1ML61	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1ML61_SOYBN	SoyBase	E_val: 7.00E-84	ISS

Expression Patterns of Glyma04g15361

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma04g15361 not represented in the dataset	Glyma04g15361 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g15361 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.04g126700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma04g15361

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma04g15361

Limit To All Plant Sequences

>Glyma04g15361.2   sequence type=transcript   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CTTTACGACTCTGAACAGCGGAGGTGATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAATTCATTTTCTTATTACTTCTGCCCCCCTTTTGATTAGTTTCCAAGCCTGATAATGTTGTT

>Glyma04g15361.3   sequence type=transcript   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTTGATTCTTGGTGATTGGAGATTGGTGAAAAAATAGCTTACAAGCAATCTAAATTCGCATTTTAGGAAGTTGAATATCATTCAGAATGATGGTCAATTACAAGCAAAAGAGCAATCAATTGAAAGCTCTACTGAAGTGAACCAAAATAACAACTCTATACTTGAAGAAAATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGATTGGAGCAACTACATCAATCGGATTAATCATAAAAATAGTACTGTTTTCAAATTGTAAAGAGTGGATAGGGTGAATGAAACAGAGAGTGAAAGTTACAACAACATATAGAAGCAAAGGTGCAGACCATTTTTTGCTTTCGTGTCATGATTGGG

>Glyma04g15361.4   sequence type=transcript   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTTTGATTCTTGGTGATTGGAGATTGGTGAAAAAATAGCTTACAAGCAATCTAAATTCGCATTTTAGGAAGTTGAATATCATTCAGAATGATGGTCAATTACAAGCAAAAGAGCAATCAATTGAAAGCTCTACTGAAGTGAACCAAAATAACAACTCTATACTTGAAGAAAATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAATTCATTTTCTTATTACTTCTGCCCCCCTTTTGATTAGTTTCCAAGCCTGATAATGTTGTT

>Glyma04g15361.5   sequence type=transcript   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTCGTGAGGGAATCGAGTCTTGAAAAAGAGAATGGACGGTGTTGATGCGTTATTAGGTGAAAAAGCCGAATTTTAAAAAACGCAAGTCCATAGAACGCGTTACTTCCGTTCACTTTTGAACCCAAAGAGCGGGTAGCTGAGATCGGAGAACCCTCTCTTTCTTCTCCTTCTTCAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGATTGGAGCAACTACATCAATCGGATTAATCATAAAAATAGTACTGTTTTCAAATTGTAAAGAGTGGATAGGGTGAATGAAACAGAGAGTGAAAGTTACAACAACATATAGAAGCAAAGGTGCAGACCATTTTTTGCTTTCGTGTCATGATTGGG

>Glyma04g15361.6   sequence type=transcript   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTCGTGAGGGAATCGAGTCTTGAAAAAGAGAATGGACGGTGTTGATGCGTTATTAGGTGAAAAAGCCGAATTTTAAAAAACGCAAGTCCATAGAACGCGTTACTTCCGTTCACTTTTGAACCCAAAGAGCGGGTAGCTGAGATCGGAGAACCCTCTCTTTCTTCTCCTTCTTCAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAATTCATTTTCTTATTACTTCTGCCCCCCTTTTGATTAGTTTCCAAGCCTGATAATGTTGTT

Coding sequences of Glyma04g15361

Limit To All Plant Sequences

>Glyma04g15361.1   sequence type=CDS   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGA

>Glyma04g15361.2   sequence type=CDS   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA

>Glyma04g15361.3   sequence type=CDS   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGA

>Glyma04g15361.4   sequence type=CDS   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA

>Glyma04g15361.5   sequence type=CDS   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGA

>Glyma04g15361.6   sequence type=CDS   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA

Predicted protein sequences of Glyma04g15361

Limit To All Plant Sequences

>Glyma04g15361.1   sequence type=predicted peptide   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFGSTRTALASCASSGKVASPTSTSSRRLPTTLPLPTSPRSSKDPLISPVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKKMVC*

>Glyma04g15361.2   sequence type=predicted peptide   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MFGSTRTALASCASSGKVASPTSTSSRRLPTTLPLPTSPRSSKDPLISPVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*

>Glyma04g15361.3   sequence type=predicted peptide   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHNLKEVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKKMVC*

>Glyma04g15361.4   sequence type=predicted peptide   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHNLKEVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*

>Glyma04g15361.5   sequence type=predicted peptide   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKKMVC*

>Glyma04g15361.6   sequence type=predicted peptide   gene model=Glyma04g15361   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*

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