|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G12930 | AT | Annotation by Michelle Graham. TAIR10: ARM repeat superfamily protein | chr1:4398588-4405495 REVERSE LENGTH=1005 | SoyBase | E_val: 1.00E-52 | ISS |
GO:0008150 | GO-bp | Annotation by Michelle Graham. GO Biological Process: biological process | SoyBase | N/A | ISS |
GO:0005575 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cellular component | SoyBase | N/A | ISS |
PTHR12363 | Panther | NUCLEAR TRANSPORT PROTEIN | JGI | ISS | |
PTHR12363:SF4 | Panther | gb def: cg7212 gene product [drosophila melanogaster] | JGI | ISS | |
UniRef100_G7KYC8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Transportin-3 n=1 Tax=Medicago truncatula RepID=G7KYC8_MEDTR | SoyBase | E_val: 1.00E-70 | ISS |
UniRef100_I1ML61 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1ML61_SOYBN | SoyBase | E_val: 7.00E-84 | ISS |
Glyma04g15361 not represented in the dataset |
Glyma04g15361 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.04g126700 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma04g15361.2 sequence type=transcript gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high CTTTACGACTCTGAACAGCGGAGGTGATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAATTCATTTTCTTATTACTTCTGCCCCCCTTTTGATTAGTTTCCAAGCCTGATAATGTTGTT >Glyma04g15361.3 sequence type=transcript gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTTTGATTCTTGGTGATTGGAGATTGGTGAAAAAATAGCTTACAAGCAATCTAAATTCGCATTTTAGGAAGTTGAATATCATTCAGAATGATGGTCAATTACAAGCAAAAGAGCAATCAATTGAAAGCTCTACTGAAGTGAACCAAAATAACAACTCTATACTTGAAGAAAATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGATTGGAGCAACTACATCAATCGGATTAATCATAAAAATAGTACTGTTTTCAAATTGTAAAGAGTGGATAGGGTGAATGAAACAGAGAGTGAAAGTTACAACAACATATAGAAGCAAAGGTGCAGACCATTTTTTGCTTTCGTGTCATGATTGGG >Glyma04g15361.4 sequence type=transcript gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTTTGATTCTTGGTGATTGGAGATTGGTGAAAAAATAGCTTACAAGCAATCTAAATTCGCATTTTAGGAAGTTGAATATCATTCAGAATGATGGTCAATTACAAGCAAAAGAGCAATCAATTGAAAGCTCTACTGAAGTGAACCAAAATAACAACTCTATACTTGAAGAAAATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAATTCATTTTCTTATTACTTCTGCCCCCCTTTTGATTAGTTTCCAAGCCTGATAATGTTGTT >Glyma04g15361.5 sequence type=transcript gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTCGTGAGGGAATCGAGTCTTGAAAAAGAGAATGGACGGTGTTGATGCGTTATTAGGTGAAAAAGCCGAATTTTAAAAAACGCAAGTCCATAGAACGCGTTACTTCCGTTCACTTTTGAACCCAAAGAGCGGGTAGCTGAGATCGGAGAACCCTCTCTTTCTTCTCCTTCTTCAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGATTGGAGCAACTACATCAATCGGATTAATCATAAAAATAGTACTGTTTTCAAATTGTAAAGAGTGGATAGGGTGAATGAAACAGAGAGTGAAAGTTACAACAACATATAGAAGCAAAGGTGCAGACCATTTTTTGCTTTCGTGTCATGATTGGG >Glyma04g15361.6 sequence type=transcript gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GTCGTGAGGGAATCGAGTCTTGAAAAAGAGAATGGACGGTGTTGATGCGTTATTAGGTGAAAAAGCCGAATTTTAAAAAACGCAAGTCCATAGAACGCGTTACTTCCGTTCACTTTTGAACCCAAAGAGCGGGTAGCTGAGATCGGAGAACCCTCTCTTTCTTCTCCTTCTTCAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAATTCATTTTCTTATTACTTCTGCCCCCCTTTTGATTAGTTTCCAAGCCTGATAATGTTGTT
>Glyma04g15361.1 sequence type=CDS gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGA >Glyma04g15361.2 sequence type=CDS gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA >Glyma04g15361.3 sequence type=CDS gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGA >Glyma04g15361.4 sequence type=CDS gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA >Glyma04g15361.5 sequence type=CDS gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAAATGGTATGTTGA >Glyma04g15361.6 sequence type=CDS gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA
>Glyma04g15361.1 sequence type=predicted peptide gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFGSTRTALASCASSGKVASPTSTSSRRLPTTLPLPTSPRSSKDPLISPVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKKMVC* >Glyma04g15361.2 sequence type=predicted peptide gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFGSTRTALASCASSGKVASPTSTSSRRLPTTLPLPTSPRSSKDPLISPVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK* >Glyma04g15361.3 sequence type=predicted peptide gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MHNLKEVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKKMVC* >Glyma04g15361.4 sequence type=predicted peptide gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MHNLKEVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK* >Glyma04g15361.5 sequence type=predicted peptide gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKKMVC* >Glyma04g15361.6 sequence type=predicted peptide gene model=Glyma04g15361 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||