Report for Sequence Feature Glyma04g14790
Feature Type: gene_model
Chromosome: Gm04
Start: 14974937
stop: 14979059
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g14790
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G45380 AT
Annotation by Michelle Graham. TAIR10: solute:sodium symporters;urea transmembrane transporters | chr5:18391337-18395696 FORWARD LENGTH=704
SoyBase E_val: 0 ISS
GO:0006810 GO-bp
Annotation by Michelle Graham. GO Biological Process: transport
SoyBase N/A ISS
GO:0006995 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to nitrogen starvation
SoyBase N/A ISS
GO:0035725 GO-bp
Annotation by Michelle Graham. GO Biological Process: sodium ion transmembrane transport
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
GO:0015204 GO-mf
Annotation by Michelle Graham. GO Molecular Function: urea transmembrane transporter activity
SoyBase N/A ISS
GO:0015370 GO-mf
Annotation by Michelle Graham. GO Molecular Function: solute:sodium symporter activity
SoyBase N/A ISS
KOG2348
KOG
Urea transporter
JGI ISS
PTHR11819 Panther
SODIUM/SOLUTE SYMPORTER
JGI ISS
PTHR11819:SF15 Panther
gb def: proline permease (putp-2) [archaeoglobus fulgidus]
JGI ISS
PF00474 PFAM
Sodium:solute symporter family
JGI ISS
UniRef100_G7K6S1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Urea active transporter-like protein n=1 Tax=Medicago truncatula RepID=G7K6S1_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233A6A8 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A6A8 related cluster n=1 Tax=unknown RepID=UPI000233A6A8
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g14790
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma04g14790 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g123700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g14790
Coding sequences of Glyma04g14790
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g14790.1 sequence type=CDS gene model=Glyma04g14790 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCTGCATTAGTAGAGTGTCCACCATTTGAATTTTCTAGCAAGTACTATCATGTGTCTGAAAATGGAGGTGTGTGTGTGAGGCAGACCAGTTTCTTTGAAGGCAAACCAGTGCTTAATCAGGGTGTTGGTTACTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCCGTCTTCACCTCTTTCTTGGTGTGGCTGGAGAAGCGTTATGTTGGGTCACGTCACACATCTGAATGGTTCAATACAGCAGGAAGAAATGTTAAGACGGGGCTTATTGCAAGTGTCATTGTGTCTCAGTGGACATGGGCTGCTACAATCCTGCAAAGCTCTAATGTTGCATGGGAGTATGGAGTTAGTGGACCTTTCTGGTATGCTAGTGGGGCCACCATCCAGGTATTGTTGTTTGGAATCATGGCTATAGAGATTAAAAGAAAGGCTCCTCATGCTCATACTGTGTGTGAAATTGTCAAGGCCCGTTGGGGGACTTCTGCGCACATTGTTTTCCTCATTTTCTGCTTCTTGACGAATATAATTGTGACGGCTATGTTGCTCCTCGGTGGTTCTGCGGTTGTAAATGCATTAACTGGAGTGAACCTTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTATACACTAGCGGGTGGACTGAAGGCCACATTCTTAGCAAGCTATATCCATTCTGTCATAGTGCACATTGTTTTGGTGATTTTTGTCTACCTTGTCTACACGGCTAGCAGCGAGCTTGGTAGCCCTTCTGTTGTTTACAATCGCCTGCTAGAGGTTGCAAGCAAATCAAGAACATGTCAGGATCCTATATCACACCAAGGACAATCTTGTGGTCCAGTTAGTGGTAATCACAAAGGTTCTTACCTAACAATGCTAAGTTCCGGTGGCTTAGTTTTTGGGATTATAAACATTGTTGGAAATTTTGGCACTGTGTTTGTTGACAATGGATATTGGGTGAGTGCCATTGCTGCAAGACCTTCATCTACTCATAAGGGGTACTTGTTGGGAGGCTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCTACATCATTAGGTCTAGGAGCCCTGGCCCTTGATTTACCAATAAATGAAAATGAAGCAGGCCGTGGACTTGTTCCCCCTGCTACGGCTGTAGCTTTGATGGGGAAAGGAGGATCTATTCTTCTTCTTACCATGCTTTTTATGGCAGTAACTTCTGCTGGTTCATCAGAACTCATTGCGGTGTCCTCATTATGCACATATGATATCTACCGAACTTACATAAATCCTAATGCAAGTGGAAAGCAAATCCTCAAAGTGTCAAGGGGTGTCGTCCTAGGATTCGGGTGTTTCATGGGGTTGTTAGCAGTTATACTGAACAAGGCTGAAGTTTCTTTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGCTCAGCAGTTCTTCCCATTGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAATTGGAGCCATTCTTGGAACAGTGTTAGGTTGTGTTTTAGGAATTATCACTTGGCTGTCTGTTACAAAAATACAATATGGCCGGGTAAACCTCAATACAACTGGCAGAAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTAACTGGAGGAGTTGCTCATGCTGTCTGCAGCATGTTGAGACCTCAGAACTATGACTGGAGTACCACCAAGCAAATCACAGTGGTTGAAAAGGAAAAATCTAATCTTCCAGCAGAAGAGTTTAAAGAAGAAAAACTAATCAGAGCTAAATCATGGGTGGTGAAGTGGGGTGTTGGTTTCACTCTTTTGATTGTCATTCTATGGCCTATTCTCTCCCTCCCAGCAGGGGAGTTTAGTAAGGGCTACTTCTATTTCTGGGCAGTGATTGCTATAGGATGGGGTACTGTTGGTTCTGCTGTGATAATTGTTTTACCACTAATAGAGAGCTGGGAAACCATTCAGACAGTTATTATGGGCATGTTTACAAATGACAGGCTCATGGAAAAGGTAGAGGAGTTAAATTTCAAGTTGCAGACCATCATGCAGGCAATGCCAGAAGCTGAGAGACTTTACTTGCTTGAGAAGGGGAAGGCCAAAAAGTTAGACTCCTCGGAACAGCAGGCTAGTTCTCTTCCTGCATAA
Predicted protein sequences of Glyma04g14790
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g14790.1 sequence type=predicted peptide gene model=Glyma04g14790 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASALVECPPFEFSSKYYHVSENGGVCVRQTSFFEGKPVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTSAHIVFLIFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNRLLEVASKSRTCQDPISHQGQSCGPVSGNHKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINENEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKQILKVSRGVVLGFGCFMGLLAVILNKAEVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAIGAILGTVLGCVLGIITWLSVTKIQYGRVNLNTTGRNAPMLAGNLVSILTGGVAHAVCSMLRPQNYDWSTTKQITVVEKEKSNLPAEEFKEEKLIRAKSWVVKWGVGFTLLIVILWPILSLPAGEFSKGYFYFWAVIAIGWGTVGSAVIIVLPLIESWETIQTVIMGMFTNDRLMEKVEELNFKLQTIMQAMPEAERLYLLEKGKAKKLDSSEQQASSLPA*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
