Glyma04g14591 - SoyBase

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Report for Sequence Feature Glyma04g14591

Feature Type:	gene_model
Chromosome:	Gm04
Start:	14687096
stop:	14687358
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma04g14591

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G28850	AT	Annotation by Michelle Graham. TAIR10: Calcium-binding EF-hand family protein \| chr5:10877360-10879416 REVERSE LENGTH=324	SoyBase	E_val: 7.00E-26	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0005509	GO-mf	Annotation by Michelle Graham. GO Molecular Function: calcium ion binding	SoyBase	N/A	ISS
PTHR14095	Panther	PHOSPHATASE 2A REGULATORY SUBUNIT-RELATED	JGI		ISS
UniRef100_I1LBR1	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1LBR1_SOYBN	SoyBase	E_val: 3.00E-23	ISS
UniRef100_Q940C6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: AT5g28850/F7P1_30 n=1 Tax=Arabidopsis thaliana RepID=Q940C6_ARATH	SoyBase	E_val: 3.00E-23	ISS

Expression Patterns of Glyma04g14591

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma04g14591 not represented in the dataset	Glyma04g14591 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g14591 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.04g122500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma04g14591

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma04g14591

Limit To All Plant Sequences

>Glyma04g14591.1   sequence type=CDS   gene model=Glyma04g14591   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCCTTTGAAACTCGTGACCCATTTTTTATTTGTCAGGAAGGTGAGAATCCTACATTGATAGAGTGGGATCGCTTTGCTCATAGAGAATATATTAGGCTTTCAATGGAAGAAGATGTAGAGGATGCCTCTAACGGTAGTCTAGAAGTTTGGGATAAATAA

Predicted protein sequences of Glyma04g14591

Limit To All Plant Sequences

>Glyma04g14591.1   sequence type=predicted peptide   gene model=Glyma04g14591   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAFETRDPFFICQEGENPTLIEWDRFAHREYIRLSMEEDVEDASNGSLEVWDK*

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