SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G66020 | AT | Annotation by Michelle Graham. TAIR10: Phosphoinositide phosphatase family protein | chr5:26401193-26404691 REVERSE LENGTH=593 | SoyBase | E_val: 0 | ISS |
| GO:0032957 | GO-bp | Annotation by Michelle Graham. GO Biological Process: inositol trisphosphate metabolic process | SoyBase | N/A | ISS |
| GO:0046855 | GO-bp | Annotation by Michelle Graham. GO Biological Process: inositol phosphate dephosphorylation | SoyBase | N/A | ISS |
| GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
| GO:0004439 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | SoyBase | N/A | ISS |
| GO:0042578 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphoric ester hydrolase activity | SoyBase | N/A | ISS |
| KOG1889 | KOG | Putative phosphoinositide phosphatase | JGI | ISS | |
| PTHR11200 | Panther | INOSITOL 5-PHOSPHATASE | JGI | ISS | |
| PF02383 | PFAM | SacI homology domain | JGI | ISS | |
| UniRef100_G7K028 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Phosphatidylinositide phosphatase SAC1 n=1 Tax=Medicago truncatula RepID=G7K028_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_UPI000233C3AB | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI000233C3AB related cluster n=1 Tax=unknown RepID=UPI000233C3AB | SoyBase | E_val: 0 | ISS |
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Glyma04g14320 not represented in the dataset |
Glyma04g14320 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.04g121500 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma04g14320.2 sequence type=CDS gene model=Glyma04g14320 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTCTGCAGTGCACAACGATTGAATGACCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTCCTATGGAACAATTATATGTTAGAAGTGCTTATAGATAACAAGGTAGGCTTTCATCACTTTCAAGCAGTCATTGGGAAAGATATTATTGATGTCAATTTGACTGCCAGGAGATGCACAGGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGTTGATCCTGATGGCTATGTTGCCAATTTTGTGGAAATAGAACAAATTATGCAGTTTAATGGGTATACTGCTTCATTTGTTCAGGTCCGTGGTTCTATCCCACTCCTCTGGCAGCAAATTGTTGACTTAACTTATAAACCAAAGTTTGAGTTATTGAAACTTGAGGAAGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATATGGGGCAGTATTGGCTGTTGATGTTGTTAACGAGCATGGCGGAGAAGGGCGACTGTGTGAAAAATTTGGTGATGCATCGCAGCATGTGGCTGGTAATGATATATCTGCACTTGGATTTCACCATGTCTGTGGGCATGTTCATTTTGATCGTCTCTCAATCCTGTATGATCAAATTCAAGATATCCTTGAGAGAAATGGATATCTTCTATTGAATGGAAAAGGAGAGAAAATGAAGGAGCAAGTTAGAGTTGTTAGGACCAATTGTATAGATTGTTTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTGGAATATCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAATCTGGATGAAAACTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTATTCAATACTCAGGAACTCCTGCTCTTAAAGGAGACTTTGTCAGATTTGGGCACCGCACAATTCAAGGGATACTACAAGATGGTGTCAATGCTCTTCTACGATATTATTTCAATAATTTTGATGCAATTGATCTCTTGCAAGGACATTATATAGTTTCTGTTGGCCGAGATACAGCCGCCACTTCTCAGAAAGGATGCCTTGAAGCTTCATTTCCTCTGGCGTTGGGTCTGGTTTTGATTGGTTTCCTTTTTGCAGCCATGTCACTGAGGCAAGTTCAATATGATTTTCGGCACATCTTCTTTTCGCTAATGTGGGCGGGCATTAGCATCGGCATAGCAGCATTTGTGAGGGCTAATGGTCGTGTTTTCTGCAACAGGCCTCGCCTACACAACCCCCGGTGA
>Glyma04g14320.2 sequence type=predicted peptide gene model=Glyma04g14320 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFCSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKVGFHHFQAVIGKDIIDVNLTARRCTGRNGTRMWRRGVDPDGYVANFVEIEQIMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLAVDVVNEHGGEGRLCEKFGDASQHVAGNDISALGFHHVCGHVHFDRLSILYDQIQDILERNGYLLLNGKGEKMKEQVRVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDENFKILWANHGDDISIQYSGTPALKGDFVRFGHRTIQGILQDGVNALLRYYFNNFDAIDLLQGHYIVSVGRDTAATSQKGCLEASFPLALGLVLIGFLFAAMSLRQVQYDFRHIFFSLMWAGISIGIAAFVRANGRVFCNRPRLHNPR*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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