Glyma04g10950 - SoyBase

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Report for Sequence Feature Glyma04g10950

Feature Type:	gene_model
Chromosome:	Gm04
Start:	9212411
stop:	9216612
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma04g10950

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G34780	AT	Annotation by Michelle Graham. TAIR10: APR-like 4 \| chr1:12748835-12750124 REVERSE LENGTH=310	SoyBase	E_val: 2.00E-57	ISS
GO:0045454	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell redox homeostasis	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
KOG0907	KOG	Thioredoxin	JGI		ISS
PTHR18929	Panther	PROTEIN DISULFIDE ISOMERASE	JGI		ISS
PF00085	PFAM	Thioredoxin	JGI		ISS
UniRef100_I1JVD5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JVD5_SOYBN	SoyBase	E_val: 4.00E-152	ISS
UniRef100_Q9SA00	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: 5'-adenylylsulfate reductase-like 4 n=1 Tax=Arabidopsis thaliana RepID=APRL4_ARATH	SoyBase	E_val: 8.00E-55	ISS

Expression Patterns of Glyma04g10950

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g10950 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.04g101100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma04g10950

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma04g10950

Limit To All Plant Sequences

>Glyma04g10950.1   sequence type=CDS   gene model=Glyma04g10950   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGGATTATGGTTTGGGGATCGGAGATCGTGTTCGCCATATTGCTCTGTGGGACCCTCTCATGCACCGCTCAAGCTCATCATAATAGGGTTTCTCTCTCCTCCACCACCGCCATCTGTCCCGCTCGCCCCCTTCTCGATTTCATCTTAGGGTTTTCAGATTCCACCTGCTCCCTTCCCAATTCTCTTGGATCCATTGCCGTCACCGAGGGAGATGAGTTTTTTTTGCATAAGGCGTTGAATATGGTTCACAAGAATAATCATGAGTATGTGGCTGTGCTCTTCTATGCATCCTGGTGCCCTTTCTCGCGGGTGTTTAGACCAGTTTTCTCCATCCTTTCTGCGCTGTACCCTTCCATTACTCATCTTGCCATTGAAGAATCATCAGTTTGGCCGAGCATACTGTCCAAATATGGTGTCCATAGTGTCCCTACACTGTTCATTTTGAATTCTACCATGCGTGTCCGGTATCATGGGTCTCGGAGATTTGGCTCGCTCATTGGTTTCTATAATGATGTTACTGGGATTAGGATTGATTCACTTGATCAACTATCACTTGAGAAAATTGGTCATTCATCTGCCAATGAGAGTCATGGTAACACTGAGCCAGAAAGTTCTCCATTTTCACCGGGCTAG

Predicted protein sequences of Glyma04g10950

Limit To All Plant Sequences

>Glyma04g10950.1   sequence type=predicted peptide   gene model=Glyma04g10950   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MRIMVWGSEIVFAILLCGTLSCTAQAHHNRVSLSSTTAICPARPLLDFILGFSDSTCSLPNSLGSIAVTEGDEFFLHKALNMVHKNNHEYVAVLFYASWCPFSRVFRPVFSILSALYPSITHLAIEESSVWPSILSKYGVHSVPTLFILNSTMRVRYHGSRRFGSLIGFYNDVTGIRIDSLDQLSLEKIGHSSANESHGNTEPESSPFSPG*

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