Report for Sequence Feature Glyma04g09400
Feature Type: gene_model
Chromosome: Gm04
Start: 7632108
stop: 7633393
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g09400
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G09960 AT
Annotation by Michelle Graham. TAIR10: sucrose transporter 4 | chr1:3244258-3246718 FORWARD LENGTH=510
SoyBase E_val: 2.00E-116 ISS
GO:0015770 GO-bp
Annotation by Michelle Graham. GO Biological Process: sucrose transport
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0005887 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0005351 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity
SoyBase N/A ISS
GO:0008506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sucrose:hydrogen symporter activity
SoyBase N/A ISS
GO:0008515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sucrose transmembrane transporter activity
SoyBase N/A ISS
GO:0015144 GO-mf
Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity
SoyBase N/A ISS
PTHR19432 Panther
SUCROSE TRANSPORT PROTEIN
JGI ISS
PTHR19432:SF2 Panther
PROSTEIN PROTEIN
JGI ISS
UniRef100_I1JV06 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JV06_SOYBN
SoyBase E_val: 0 ISS
UniRef100_J7FDW2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: SUT4-2 n=1 Tax=Medicago truncatula RepID=J7FDW2_MEDTR
SoyBase E_val: 4.00E-152 ISS
Expression Patterns of Glyma04g09400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma04g09400 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g088900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g09400
Coding sequences of Glyma04g09400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g09400.2 sequence type=CDS gene model=Glyma04g09400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTAGGCAAGGATCACCGAAGGACACGTGTTGCAAATGCTTATTACTCCCTGTTTATGGCAATTGGTAATATTCTTGGATATACAACTGGATCATACAGTGGTTGGTACAAGGTCTTTGCTTTGGCACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTATTTCTCGACATTATTTTCATTGCTGTCACCACATATATAAGCATTGTGGCAGCTAAAGAAGTGCCTCTAAGTTCAAGTGGAGCACTCCCTGTTGAAGAAGCAGCAGCAGGGGAATCAGGTACTGCAGGAGAAGCTTTCCTGTGGCAGCTATTTGGGACATTCAGATATTTTTCGACCCCTATATGGACAATACTGACTGTTAATGCTCTAAGATGGATTGGGTGGTTTCCATTTCTCCTATTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAGCCAAATGAAGGCCCTAATCATGATACTGGAGTTAGAATGGGGGCACTTGGCTTACTGCTTAATTCAGTTGTTCTTGGAGTAACGTCAGTACTCTTGGAGAGGCTATGCAGGAAGCGGGGACCTGGGTTTCTGTGGGGAATTTCAAATATCCTAATGGCTGTCTGCTTTATTTCAATGCTTGTTGTAACCTATGTGGCAAATAACATTGGCTATGTAGGCAAAGATCTACCACCAACTGGCATTGTGATAGCTTCATTGATAATCTTTATCGTTCTTGGATTTCCACATGCAATCACTTACAGCTTTCCATATGCCTTGATTTCCACACACATTCAGTCATTGGGGCTTGGTCATTGTGGGCAGGATTGA
Predicted protein sequences of Glyma04g09400
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g09400.2 sequence type=predicted peptide gene model=Glyma04g09400 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLGKDHRRTRVANAYYSLFMAIGNILGYTTGSYSGWYKVFALALTPACNISCANLKSALFLDIIFIAVTTYISIVAAKEVPLSSSGALPVEEAAAGESGTAGEAFLWQLFGTFRYFSTPIWTILTVNALRWIGWFPFLLFDTDWMGREIYGGEPNEGPNHDTGVRMGALGLLLNSVVLGVTSVLLERLCRKRGPGFLWGISNILMAVCFISMLVVTYVANNIGYVGKDLPPTGIVIASLIIFIVLGFPHAITYSFPYALISTHIQSLGLGHCGQD*