Report for Sequence Feature Glyma04g08630
Feature Type: gene_model
Chromosome: Gm04
Start: 6761088
stop: 6762189
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g08630
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G29880 AT
Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 260 Blast hits to 212 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 240; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr2:12742536-12743545 FORWARD LENGTH=308
SoyBase E_val: 2.00E-54 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1JUT4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JUT4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g08630
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma04g08630 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g081500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g08630
Coding sequences of Glyma04g08630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g08630.1 sequence type=CDS gene model=Glyma04g08630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGGGATTCACAAGAAAATAACAAAGGAAAGAGTAGAGACAAAGATAATTATGTATCTTGGACTATGGAGGATACCAATGAGTTGTTGCACCTCTTGGTGGATGCTATGAATAGGGGATTGCGTGATGCCAATGGGTCACTTAGCAAACAAAATGTAGAACGAATAATACTTCCTCAACTCAATGCAAAAACTAAATTCCCTAAAACTTATAGTCATTATTTGAGTCGGATGAAGTGGTTTCGAAACCAGTATAACATGATGTCAACCCTTATGCGCAACAACTCTGGCTTTGGATGGGACCCAATTGGAAAAACTTTCACTGCTCATGAGGATGTATGGAAAGATTACTTAAAGTCCCACCCAAGTCACAGCAAACTTCGAGGAAAAAGTATGGTTGATTATGAGTATTTGAAGATCGTTGTTGGGGGTGGAGTTTCTAGCGGGAATAATTCTATATCAGTCGATCCAGATGATACTGATGCAACAACTTTTGAGCCAGAAAATAGAACTGTTGGGATAGAAGAATTTTCATATGATCCTAATAGTGATACATTCATAACACCAAATAACTATGAACTAGCATATCAGCCTCCATCACCAAACCAACCAAGTCCACCATCCCACCCCCCTTTAGATTCAGAGGTTCCCATAGAAAAACAAAACTGTCACAAGCGAAGGAGATCCGAGTATGGAGGGAGTTCAAGCGCTGTTGGGATCAACAATCAAGGCAACGTTCTGGAAAATCTTTCTGTTGGCATTGGGACTATTGCTGTGAATTTTGAAAAAATATCCAACATGATGGAGAAAAGAGAAAAAGATAGAGATAGAGATAGAGAGCTCGAGGGTATTATTTGGGATGTTATAAAAGAAATTCCAAATTTGGATGACATAACGCGTTTCAAGACAGCTGAATTGTTAAATACTAAAGCAAAAAAAGATTTTTTCTTGAAGATGTCACCGGAAGAACGCTCATCTTGGATAAACTTTAAGTTAGGGAATAATTAA
Predicted protein sequences of Glyma04g08630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g08630.1 sequence type=predicted peptide gene model=Glyma04g08630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGDSQENNKGKSRDKDNYVSWTMEDTNELLHLLVDAMNRGLRDANGSLSKQNVERIILPQLNAKTKFPKTYSHYLSRMKWFRNQYNMMSTLMRNNSGFGWDPIGKTFTAHEDVWKDYLKSHPSHSKLRGKSMVDYEYLKIVVGGGVSSGNNSISVDPDDTDATTFEPENRTVGIEEFSYDPNSDTFITPNNYELAYQPPSPNQPSPPSHPPLDSEVPIEKQNCHKRRRSEYGGSSSAVGINNQGNVLENLSVGIGTIAVNFEKISNMMEKREKDRDRDRELEGIIWDVIKEIPNLDDITRFKTAELLNTKAKKDFFLKMSPEERSSWINFKLGNN*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
