Report for Sequence Feature Glyma04g08150
Feature Type: gene_model
Chromosome: Gm04
Start: 6393326
stop: 6396567
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g08150
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G31240 AT
Annotation by Michelle Graham. TAIR10: protein kinase C-like zinc finger protein | chr4:15176637-15177986 REVERSE LENGTH=392
SoyBase E_val: 3.00E-168 ISS
GO:0016036 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation
SoyBase N/A ISS
GO:0019375 GO-bp
Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process
SoyBase N/A ISS
GO:0045892 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0016209 GO-mf
Annotation by Michelle Graham. GO Molecular Function: antioxidant activity
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
GO:0047134 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein-disulfide reductase activity
SoyBase N/A ISS
KOG2501
KOG
Thioredoxin, nucleoredoxin and related proteins
JGI ISS
PTHR13871 Panther
THIOREDOXIN
JGI ISS
PTHR13871:SF2 Panther
THIOREDOXIN - RELATED
JGI ISS
PF00578 PFAM
AhpC/TSA family
JGI ISS
PF07649 PFAM
C1-like domain
JGI ISS
UniRef100_G7J2U5 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Nucleoredoxin n=2 Tax=Medicago truncatula RepID=G7J2U5_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1JUN8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JUN8_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g08150
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma04g08150
Paralog Evidence Comments
Glyma06g08220 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma04g08150 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g076900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g08150
Transcripts of Glyma04g08150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g08150.2 sequence type=transcript gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CAAGGATTAGTAACTTATGAGTTCATAAATGCTTCTTGGTGTGGTGGAAAATCACGGTCGGACACCGTGGTTTGGTTTTCGGGTTTCCACCGCAAATCCAAACACACTACTAATTACAGTTGGACCCACCTAAACTTTTACACATATGTATTCTAATTCTGGCACGTAAGATATGAGGAGATGTGACTCTTTCTATATATGTATGAAGCATTTTCCAATTGAGTTATATTAGAAAGAATCATTGATCATCAAAATCATTTGCAAGTCGTTTAGAGAGTGCGATGCTGTTTCATTTGAAAGGCGTGTACGCAACCCTTTGCCTGGTTTTAAAGACTGAAGCACCCTCCTGGGGAATATTCCCCCATATTCATTTTCATACATGATCATCAATTTTTGTGCTCTTTGTTAAGTCTTGCTTGCTTCCCACTTCAGAAATTTCTGTTCTCCAAGTTTGGTTCACATAGCTATAGTATAAGATTTTTCCACTCTGTTTCCTTCCAATTGAAGGACAGCTACAGAGAAATTGTGAAATTTAAGAAAGAGCCAAAGATGCCCTTGCGCAGAATCTGAACTGCTTCTGTCTCAAGGTCTTTCGGCCCTTACAATTTGCAAAAGTCTCAAGGAAGCTTATAAAAAGAGAGCACATCTGTTTTATTCAGTTCCGATGGCAGGGTTAAATTTTGAAGCCACACATACTGACAACCGTGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCGTGTCAGAATGCAATGGGAAAATTATCTGCCTATTTTTCACTGCAAACTGGTGCAGACCTTGCAGAGCTTTCGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAAGAGGCGAATAAATCTAGAGATTATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAATATGCCATGGCTAGCTGTTCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCATTCGTTCCATCTTGTTCAGATGGCATAACCATTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGGCATAGATATAAGGAAGCGCGAGGAAGCAGACTTGGAAGAATTATTGGGACACGAAGGAGGCAAATTTCTCATCTCTGGAGATGATAGAAAGGTGCCACTATCTGAACTAGCTGGTAAAACCATAGGCCTGTATTTTGGTGCCTATTGGTCTCCTCCTTGCTGCGCTTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCGGCAAAAGGCGACTGCTTTGAGATTGTTTTAATCTCAACAGATAGGGACCTTGAGGAATTCAATGTCAACAAAAGTACTATGCCATGGCTTGCTGTCCCATATGAGGACAGGACAAGGCATGACCTTCGAAGAATCTTCGATGTAAAGGGCATTCCTGCATTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGTGAATGGAAAGTTAATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTCACCGAATCGCGGATAAGAGACCTTGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCCGCAGGTTGAGGATGTGAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAAGCAAGGCAAATTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTTCATCCAAGTTGTCTAGAAAAGGTCAACAAGGACTAAAGTTGATAGAGAACAGAAACACGCAAGTTTGCTACCAATTATATCAACTAGCTATTTTTGTGGCGATGGAAATAAAGTTGTAATACATAAGAAACTTAAACACTATATATCTTTCTATCCTATCAGTATGTTGTTATACTTGCCGTTTGAAATTAAGAGTGATTTAAATCAGGTGAATGTGGTAAGGGAAAGATCTGAATAGAATTACTCAGTTTAAGAAAGTTTAGGCACACACTATTTAAAGTATCTATGGTTTTTAATTGGGGAGGATGTCTGTATGATAATTTTGATACGACTTTATACATACCCAAGGGTAAATTTAATGGTGGAAAA
>Glyma04g08150.3 sequence type=transcript gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
CAAGGATTAGTAACTTATGAGTTCATAAATGCTTCTTGGTGTGGTGGAAAATCACGGTCGGACACCGTGGTTTGGTTTTCGGGTTTCCACCGCAAATCCAAACACACTACTAATTACAGTTGGACCCACCTAAACTTTTACACATATGTATTCTAATTCTGGCACGTAAGATATGAGGAGATGTGACTCTTTCTATATATGTATGAAGCATTTTCCAATTGAGTTATATTAGAAAGAATCATTGATCATCAAAATCATTTGCAAGTCGTTTAGAGAGTGCGATGCTGTTTCATTTGAAAGGCGTGTACGCAACCCTTTGCCTGGTTTTAAAGACTGAAGCACCCTCCTGGGGAATATTCCCCCATATTCATTTTCATACATGATCATCAATTTTTGTGCTCTTTGTTAAGTCTTGCTTGCTTCCCACTTCAGAAATTTCTGTTCTCCAAGTTTGGTTCACATAGCTATAGTATAAGATTTTTCCACTCTGTTTCCTTCCAATTGAAGGACAGCTACAGAGAAATTGTGAAATTTAAGAAAGAGCCAAAGATGCCCTTGCGCAGAATCTGAACTGCTTCTGTCTCAAGGTCTTTCGGCCCTTACAATTTGCAAAAGTATAAACTACTGTGAGAGTTAAAATTCAAGGTCTCAAGGAAGCTTATAAAAAGAGAGCACATCTGTTTTATTCAGTTCCGATGGCAGGGTTAAATTTTGAAGCCACACATACTGACAACCGTGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCGTGTCAGAATGCAATGGGAAAATTATCTGCCTATTTTTCACTGCAAACTGGTGCAGACCTTGCAGAGCTTTCGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAAGAGGCGAATAAATCTAGAGATTATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAATATGCCATGGCTAGCTGTTCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCATTCGTTCCATCTTGTTCAGATGGCATAACCATTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGGCATAGATATAAGGAAGCGCGAGGAAGCAGACTTGGAAGAATTATTGGGACACGAAGGAGGCAAATTTCTCATCTCTGGAGATGATAGAAAGGTGCCACTATCTGAACTAGCTGGTAAAACCATAGGCCTGTATTTTGGTGCCTATTGGTCTCCTCCTTGCTGCGCTTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCGGCAAAAGGCGACTGCTTTGAGATTGTTTTAATCTCAACAGATAGGGACCTTGAGGAATTCAATGTCAACAAAAGTACTATGCCATGGCTTGCTGTCCCATATGAGGACAGGACAAGGCATGACCTTCGAAGAATCTTCGATGTAAAGGGCATTCCTGCATTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGTGAATGGAAAGTTAATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTCACCGAATCGCGGATAAGAGACCTTGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCCGCAGGTTGAGGATGTGAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAAGCAAGGCAAATTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTTCATCCAAGTTGTCTAGAAAAGGTCAACAAGGACTAAAGTTGATAGAGAACAGAAACACGCAAGTTTGCTACCAATTATATCAACTAGCTATTTTTGTGGCGATGGAAATAAAGTTGTAATACATAAGAAACTTAAACACTATATATCTTTCTATCCTATCAGTATGTTGTTATACTTGCCGTTTGAAATTAAGAGTGATTTAAATCAGGTGAATGTGGTAAGGGAAAGATCTGAATAGAATTACTCAGTTTAAGAAAGTTTAGGCACACACTATTTAAAGTATCTATGGTTTTTAATTGGGGAGGATGTCTGTATGATAATTTTGATACGACTTTATACATACCCAAGGGTAAATTTAATGGTGGAAAA
Coding sequences of Glyma04g08150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g08150.1 sequence type=CDS gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGGGTTAAATTTTGAAGCCACACATACTGACAACCGTGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCGTGTCAGAATGCAATGGGAAAATTATCTGCCTATTTTTCACTGCAAACTGGTGCAGACCTTGCAGAGCTTTCGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAAGAGGCGAATAAATCTAGAGATTATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAATATGCCATGGCTAGCTGTTCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCATTCGTTCCATCTTGTTCAGATGGCATAACCATTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGGCATAGATATAAGGAAGCGCGAGGAAGCAGACTTGGAAGAATTATTGGGACACGAAGGAGGCAAATTTCTCATCTCTGGAGATGATAGAAAGGTGCCACTATCTGAACTAGCTGGTAAAACCATAGGCCTGTATTTTGGTGCCTATTGGTCTCCTCCTTGCTGCGCTTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCGGCAAAAGGCGACTGCTTTGAGATTGTTTTAATCTCAACAGATAGGGACCTTGAGGAATTCAATGTCAACAAAAGTACTATGCCATGGCTTGCTGTCCCATATGAGGACAGGACAAGGCATGACCTTCGAAGAATCTTCGATGTAAAGGGCATTCCTGCATTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGTGAATGGAAAGTTAATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTCACCGAATCGCGGATAAGAGACCTTGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCCGCAGGTTGAGGATGTGAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAAGCAAGGCAAATTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTTCATCCAAGTTGTCTAGAAAAGGTCAACAAGGACTAA
>Glyma04g08150.2 sequence type=CDS gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGGGTTAAATTTTGAAGCCACACATACTGACAACCGTGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCGTGTCAGAATGCAATGGGAAAATTATCTGCCTATTTTTCACTGCAAACTGGTGCAGACCTTGCAGAGCTTTCGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAAGAGGCGAATAAATCTAGAGATTATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAATATGCCATGGCTAGCTGTTCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCATTCGTTCCATCTTGTTCAGATGGCATAACCATTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGGCATAGATATAAGGAAGCGCGAGGAAGCAGACTTGGAAGAATTATTGGGACACGAAGGAGGCAAATTTCTCATCTCTGGAGATGATAGAAAGGTGCCACTATCTGAACTAGCTGGTAAAACCATAGGCCTGTATTTTGGTGCCTATTGGTCTCCTCCTTGCTGCGCTTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCGGCAAAAGGCGACTGCTTTGAGATTGTTTTAATCTCAACAGATAGGGACCTTGAGGAATTCAATGTCAACAAAAGTACTATGCCATGGCTTGCTGTCCCATATGAGGACAGGACAAGGCATGACCTTCGAAGAATCTTCGATGTAAAGGGCATTCCTGCATTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGTGAATGGAAAGTTAATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTCACCGAATCGCGGATAAGAGACCTTGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCCGCAGGTTGAGGATGTGAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAAGCAAGGCAAATTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTTCATCCAAGTTGTCTAGAAAAGGTCAACAAGGACTAA
>Glyma04g08150.3 sequence type=CDS gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGGGTTAAATTTTGAAGCCACACATACTGACAACCGTGATATTCTGAAGATATTTGCAGCTGAAGGTGTTGAGTTCCTTTTATCTTGTGAAGGGAAGGTACCCGTGTCAGAATGCAATGGGAAAATTATCTGCCTATTTTTCACTGCAAACTGGTGCAGACCTTGCAGAGCTTTCGTTCCCCGTCTTGTTGAACTTTATGAAACACTGAGAAAGAGGCGAATAAATCTAGAGATTATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAACACTTCAAGAATATGCCATGGCTAGCTGTTCCATTTGATTTAAATTTGCACAGAAGACTGATTGACAGATACCAAGTTGATCGAATCCCATCATTCGTTCCATCTTGTTCAGATGGCATAACCATTGAAGAAGACTTGATTGGATGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGGCATAGATATAAGGAAGCGCGAGGAAGCAGACTTGGAAGAATTATTGGGACACGAAGGAGGCAAATTTCTCATCTCTGGAGATGATAGAAAGGTGCCACTATCTGAACTAGCTGGTAAAACCATAGGCCTGTATTTTGGTGCCTATTGGTCTCCTCCTTGCTGCGCTTTCACTGTCCAACTTACAGATGCATACAACAATCTCAAGGCGGCAAAAGGCGACTGCTTTGAGATTGTTTTAATCTCAACAGATAGGGACCTTGAGGAATTCAATGTCAACAAAAGTACTATGCCATGGCTTGCTGTCCCATATGAGGACAGGACAAGGCATGACCTTCGAAGAATCTTCGATGTAAAGGGCATTCCTGCATTGGTTCTCATTGGACCAGATGGCAAAGTAATTAGTGTGAATGGAAAGTTAATGGTCTCCTCATATGGTGCAGAAGCTTTCCCATTCACCGAATCGCGGATAAGAGACCTTGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTTTGCCTCCGCAGGTTGAGGATGTGAAGCATGAACATGTACTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAAAAAGCAAGGCAAATTCTGGACATTCTCTTGTGATGTCTGTGACTATGACCTTCATCCAAGTTGTCTAGAAAAGGTCAACAAGGACTAA
Predicted protein sequences of Glyma04g08150
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g08150.1 sequence type=predicted peptide gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAGLNFEATHTDNRDILKIFAAEGVEFLLSCEGKVPVSECNGKIICLFFTANWCRPCRAFVPRLVELYETLRKRRINLEIIFISFDRDEDGFKEHFKNMPWLAVPFDLNLHRRLIDRYQVDRIPSFVPSCSDGITIEEDLIGCIEDYGADAFPFTRKRHEELKGIDIRKREEADLEELLGHEGGKFLISGDDRKVPLSELAGKTIGLYFGAYWSPPCCAFTVQLTDAYNNLKAAKGDCFEIVLISTDRDLEEFNVNKSTMPWLAVPYEDRTRHDLRRIFDVKGIPALVLIGPDGKVISVNGKLMVSSYGAEAFPFTESRIRDLEAALRKEGEALPPQVEDVKHEHVLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKVNKD*
>Glyma04g08150.2 sequence type=predicted peptide gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAGLNFEATHTDNRDILKIFAAEGVEFLLSCEGKVPVSECNGKIICLFFTANWCRPCRAFVPRLVELYETLRKRRINLEIIFISFDRDEDGFKEHFKNMPWLAVPFDLNLHRRLIDRYQVDRIPSFVPSCSDGITIEEDLIGCIEDYGADAFPFTRKRHEELKGIDIRKREEADLEELLGHEGGKFLISGDDRKVPLSELAGKTIGLYFGAYWSPPCCAFTVQLTDAYNNLKAAKGDCFEIVLISTDRDLEEFNVNKSTMPWLAVPYEDRTRHDLRRIFDVKGIPALVLIGPDGKVISVNGKLMVSSYGAEAFPFTESRIRDLEAALRKEGEALPPQVEDVKHEHVLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKVNKD*
>Glyma04g08150.3 sequence type=predicted peptide gene model=Glyma04g08150 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAGLNFEATHTDNRDILKIFAAEGVEFLLSCEGKVPVSECNGKIICLFFTANWCRPCRAFVPRLVELYETLRKRRINLEIIFISFDRDEDGFKEHFKNMPWLAVPFDLNLHRRLIDRYQVDRIPSFVPSCSDGITIEEDLIGCIEDYGADAFPFTRKRHEELKGIDIRKREEADLEELLGHEGGKFLISGDDRKVPLSELAGKTIGLYFGAYWSPPCCAFTVQLTDAYNNLKAAKGDCFEIVLISTDRDLEEFNVNKSTMPWLAVPYEDRTRHDLRRIFDVKGIPALVLIGPDGKVISVNGKLMVSSYGAEAFPFTESRIRDLEAALRKEGEALPPQVEDVKHEHVLKLDMAKAYVCDSCKKQGKFWTFSCDVCDYDLHPSCLEKVNKD*