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Report for Sequence Feature Glyma04g08030

Feature Type:gene_model
Chromosome:Gm04
Start:6270415
stop:6272827
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma04g08030
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
UniRef100_UPI000233EF57UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233EF57 related cluster n=1 Tax=unknown RepID=UPI000233EF57 SoyBaseE_val: 9.00E-19ISS

Expression Patterns of Glyma04g08030
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g08030 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma04g08030
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma04g08030
>Glyma04g08030.1   sequence type=CDS   gene model=Glyma04g08030   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGTCGTCTGTTGGGAGAAGGGTTTGTACTTTTGACGATTTACTGCCATGTACTGAGAAGATCACTCTTTTGTATGACGAAGAGGATAGGATACTTGAGGCACATGAAGATGCTCCCTCTTCTCAACCACAATTTGAACATCAACAGTTTAATATACTACAGCGAAGTGTGGAGACTCGAGGCTTAGTGCGATTTCAGGAAACTGTTGATTCAGCACTGTACAATTTCCCTCCGATGCCAGAACGACAATATGGAATGTACAGTATGACAGACATATTTGGGTCATCTCCTCCTTCAACGGGAACTCCTTCATTTACCAAAGTGGTGAACTATCGAACTCAAATGCCCCACTTGGTGGGGGAAGGAGTGGCTTGGAGGGGGGACCACGGGTCAGCTGGATGCGCCTGGGTCTCCAACGTGCCTGTTGCAGCAGCGCTACCCATCGCGTCTGCAGAGCGCTTTCTAAGTCATCTGCCACCCTGCCACGTGTTTTACCTTTACGGGGAACGCGCTCCTCAGGGAGACGCATTGTAA
Predicted protein sequences of Glyma04g08030
>Glyma04g08030.1   sequence type=predicted peptide   gene model=Glyma04g08030   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVSSVGRRVCTFDDLLPCTEKITLLYDEEDRILEAHEDAPSSQPQFEHQQFNILQRSVETRGLVRFQETVDSALYNFPPMPERQYGMYSMTDIFGSSPPSTGTPSFTKVVNYRTQMPHLVGEGVAWRGDHGSAGCAWVSNVPVAAALPIASAERFLSHLPPCHVFYLYGERAPQGDAL*






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