Report for Sequence Feature Glyma04g03710
Feature Type: gene_model
Chromosome: Gm04
Start: 2713169
stop: 2726376
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g03710
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G47550 AT
Annotation by Michelle Graham. TAIR10: exocyst complex component sec3A | chr1:17457171-17463896 FORWARD LENGTH=887
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0000145 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: exocyst
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
KOG2148
KOG
Exocyst protein Sec3
JGI ISS
PTHR16092 Panther
SEC3/SYNTAXIN-RELATED
JGI ISS
PTHR16092:SF13 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF09763 PFAM
Exocyst complex component Sec3
JGI ISS
UniRef100_B9R7N2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Exocyst complex component sec3, putative n=1 Tax=Ricinus communis RepID=B9R7N2_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1JTE4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JTE4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g03710
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma04g03710 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g034700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g03710
Coding sequences of Glyma04g03710
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g03710.1 sequence type=CDS gene model=Glyma04g03710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCGAAATCGAGCGCCGACGATGCGGAGCTACGGCGAGCTTGCGAGCATGCCATTGAAGGCACGAAGCACAAGGTCGTTCTCTCCATTCGAACCGTCAAGACTCACGGCACTTGGGGAAAAACTGCTAAGCTTGGTCGTCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTGCACCAAAGCCAAAGTTCAGCGGACTAAAGCTTTTCTACGAGTTTTAAAGTATTCCAACGGAGGAGTTCTTGAGCCTGCTAAGTTATACAAGCTGAAGCACCTCTCAAAAATGGAAGTTGCAACAAATGATCCCAGTGGATGTACATTTACACTGGGGTTTGATAACCTTAGAAGCCAGAGTGTGGCTCCTCCACAGTGGACAATGCGCAATGTCGATGACAGAAATCGCCTCCTGTTTGGTATCTTAAATATCTGCAAAGATATCCTTGGTCGCCTGCCTAAGGTTGTTGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCGCAGTTTCCACTCAAAATAACCAACAAGATGGCACTTCTGTTGAATCTACTGCGGCTGAAACAGAATTGAAAGTCTATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTCTTGGAACTTATATCATGGGTATTGGTGAAGCCGAGGCATTTTCTGAAAGGTTAAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTCTGATAGATGAGGTGTTGCAAGGGCTTGAAGCAGCATCAAATTGCGTGGAAGACATGGATGAATGGTTAGGCATGTTCAATGTAAAGCTTCGACACATGAGGGAAGATATTGAATCAATTGAAACCCGCAATAACAAGTTGGAAATGCAAAATGTGAATAACAGAACTCTTATTCAAGAGCTTGATAAGCTTCTTGAGCAATTGAGTATCCCTTCTGAGTATTCAGCATGTTTGACAGGAGATTCATTTGATGAAGCACAAATGCTGCAAAATATGGAAGCATGTGAGTGGTTGACAACTGCCATGCGTGGTCTTGAAGTGCCTAACATAGATCCTACTTATGCAAAAATGAGAGCAGTTAAAGAGAAGCGAGGAGAACTTCAAATAATAAAGTCTGTTTTTGTTGGGAAGGCTTCTGAATACTTGAGAAGTTACTTCGCTAGTTTTGTGGATTTCATGTTAAATGATAAAAATTACTTTTCTCAGCGGGGACAGTTGAAAAGGCCAGATCATGCTGATTTGAGGTACAAGTGCAGGACATATGCACGCCTTCTGAAGCATTTAAAGATTCTTGATAAGAATTGCTTGGGTCCACTGAGAAAAGCTTATTGCAGTTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGCGAGTTTGCTAATGAACTTCGTGCTAGTGCTAAAACTTCCAAAACCCCAACTGTTTGGGAAGGCTTCATGGGTTCTGGTCAAAATGTAAATTCTGCTGACACTGCAGCAGTTTCTGAAGCGTATGCAAAGATACTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCATTTTTTGCACACTTCATGTGCTTTGAAGTTCCCTCACTTGTTGATGGTAATAAAACTGGACACAATGACCAGAAAAATGATGATGATTTGGGAATTATGGACATTGATGAGAATGACAGTAAATCTGGTAAAAATTCTGTGGATTTTGCAGCTTTAAATGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCGCTGCTGTTGTGGATTGGGCACACAAAATTGATCCTTTATGCTGCATATCAATGCATGGAACTACAGAACGCTATCTCTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGCATTTTGCTTGGTGATCTAGAGTCTCGCATATCTATGCAGTTCAGCCGTTTTGTGGATGAAGCTTGCCATCAGATTGAAAGAAGTGAGCGCAATGCTCGCCAAACGGGTGTCCTACCGTACATTCCTAGATTTGCATCCCTTGCAACACGGATGGAGCAGTATGTTGCAGGACAGTCGAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAAAAATGCACAAACAGATCCCAAGTATGCAGACATTTTTCTTATTGAAAACTATGCCGCATTTCAGAATAGTTTGTATGACCTTGCAAATGTCGTTCCCACTTTGGCGAAGTTTTATCATCAGGCTAGTGAAGCCTACGAGCAAGCTTGCACACGCCATATTAGTGTGATTATCTACTATCAATTTGAACGCCTTTTCCAGTTTGCTCGAAAGATTGAGGACTTGATATTGAATAATGTTGCACCTGAAGAGATTCCTTTCCAAGTTGGGCTGTCAAAAGCAGATCTACGGAAGACGTTAAAATCCAGTTTATCCGGGGTGGACAAGTCCATTGCTGCGATGTATAAGAAGTTGCATAAAAACTTGACTTCGGAGGAACTCTTACCTTCCTTGTGGAATAAATGCAAGAATGATTTTCTTGATAAGTACGAAACCTTTGTCCAACTTGTCGCGAGGATTTACCCTGCTGAATCAGTCCCTTCTGTAGCAGAGTTGCGAGACCTTTTAGCTTCCATGTAA
Predicted protein sequences of Glyma04g03710
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g03710.1 sequence type=predicted peptide gene model=Glyma04g03710 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAKSSADDAELRRACEHAIEGTKHKVVLSIRTVKTHGTWGKTAKLGRQMAKPRVLALCTKAKVQRTKAFLRVLKYSNGGVLEPAKLYKLKHLSKMEVATNDPSGCTFTLGFDNLRSQSVAPPQWTMRNVDDRNRLLFGILNICKDILGRLPKVVGIDVVEMALWAKENTPAVSTQNNQQDGTSVESTAAETELKVYVEKELVSQAEEEDMEALLGTYIMGIGEAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLEAASNCVEDMDEWLGMFNVKLRHMREDIESIETRNNKLEMQNVNNRTLIQELDKLLEQLSIPSEYSACLTGDSFDEAQMLQNMEACEWLTTAMRGLEVPNIDPTYAKMRAVKEKRGELQIIKSVFVGKASEYLRSYFASFVDFMLNDKNYFSQRGQLKRPDHADLRYKCRTYARLLKHLKILDKNCLGPLRKAYCSSLNLLLRREAREFANELRASAKTSKTPTVWEGFMGSGQNVNSADTAAVSEAYAKILTIFIPLLVDESSFFAHFMCFEVPSLVDGNKTGHNDQKNDDDLGIMDIDENDSKSGKNSVDFAALNESLQDLLDGIQEDFAAVVDWAHKIDPLCCISMHGTTERYLSGQKADAAGFVRILLGDLESRISMQFSRFVDEACHQIERSERNARQTGVLPYIPRFASLATRMEQYVAGQSRDLVDQAYTKFVSIMFVTLEKNAQTDPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISVIIYYQFERLFQFARKIEDLILNNVAPEEIPFQVGLSKADLRKTLKSSLSGVDKSIAAMYKKLHKNLTSEELLPSLWNKCKNDFLDKYETFVQLVARIYPAESVPSVAELRDLLASM*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
