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Report for Sequence Feature Glyma04g02431

Feature Type:gene_model
Chromosome:Gm04
Start:1696836
stop:1699749
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma04g02431
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20160AT Annotation by Michelle Graham. TAIR10: Subtilisin-like serine endopeptidase family protein | chr1:6990852-6993737 REVERSE LENGTH=730 SoyBaseE_val: 6.00E-135ISS
GO:0006508GO-bp Annotation by Michelle Graham. GO Biological Process: proteolysis SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0043086GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of catalytic activity SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0005618GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cell wall SoyBaseN/AISS
GO:0048046GO-cc Annotation by Michelle Graham. GO Cellular Compartment: apoplast SoyBaseN/AISS
GO:0004252GO-mf Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity SoyBaseN/AISS
GO:0042802GO-mf Annotation by Michelle Graham. GO Molecular Function: identical protein binding SoyBaseN/AISS
PTHR10795Panther SUBTILISIN/KEXIN-RELATED SERINE PROTEASE JGI ISS
PTHR10795:SF17Panther gb def: possible protease [sinorhizobium meliloti] JGI ISS
PF00082PFAM Subtilase family JGI ISS
UniRef100_G7J5D0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Subtilisin-type protease n=1 Tax=Medicago truncatula RepID=G7J5D0_MEDTR SoyBaseE_val: 2.00E-156ISS
UniRef100_I1JT07UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1JT07_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma04g02431
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma04g02431 not represented in the dataset
Glyma04g02431 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g02431 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.04g022200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma04g02431
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma04g02431
>Glyma04g02431.1   sequence type=CDS   gene model=Glyma04g02431   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATTTTGATTTTGATTAGGAAGATAATTGGAGCAAGACATTACCCCGACCCTCAAGGAGACAGTGAGTATGAGACACCAAGGGATAAAAATGGGCACGGAACCCACGTGGCATCCACAGCGGCGGGAGCCACCGTTCCTGGTGCGTCATACTACGGTGTCGCGGCAGGGACCGCCCAAAGTGGGTCCCCAAAATCACTACTGGCGATTTACAAAGTGTGCTTCAAATATGAGTGCCCTGGCTCTGCTGTTCTTGCAGCGTTTGATGATGCCATTGCTGATGGAGTGGATGTGATTTCGTTGTCCGTTGCTTCCCTCTCCGAGTTGAAATATAACCCAATCGCCATTGGAGCATTCCACGCCGTCGAGCGCGGCATTCTCGTGGTTGCCTCCGCCGGAAACAACGGACCAAGCTTAAACACCGTTGTCAAAGATTATCCACTGATATATAGTGAGTCTGCCCAGGCAAAAGACGCCAAGTTATCTGACGCAAGACAATGCTTCCCATATTCATTAGATAAAGTCAAAGGGAAAATTGTGGTATGCGACGGCAAAGATCACTCATGCAACTATTTTAAAAGTTCAGGCTGTGCAAGGGTTTCAGTCATTGATTTTAAGCCTGCACCCATGATGCCATCCTTTGCAGCAAAAGGGCCTTCAGCAATTTCGAAGAATATTCTCAAGCCTGAGATTACAGCACCAGGAGTTAACATTCTTGCAGCATGGATTGGCAACGACAAAGAAGGAGTTCCAAAAGGGAAAAAGCCCTCCCAATTCAACATCAAATCGGGAACTTCCATGGCATGCTCACATGTTTCAGGACTTGCAGCTACCATCAAATCTCAGAACCCTACTTGGAGTGCCTCTGCAATCAAATCAGCAACCATGGCCACAGTAACTCAAGAAAACAATTTGAAGGCTCCCATAACAACGGATAAAGGATCAGTAGCCACACCTTATGACTATGGAGCAGGGCAAATGACAATATATGGAGCATTCCACCCAGGGCTAGTTTACGAAACCAACACTATTGACTACTTGAACTATTTATGTTACGTTGGATTTAATATAACCTTGGTTAAGACTATCTCTAGAAATGCTCCTAATAATTTGAGTTGCCCCAAGCATTCGAGTTCTCATCATATTTCCAACATCAATTACCCTTCCATCGCAATCTCCGATCTCAAAGGGAAAGAATTAGTGGACGTGAATATAACTGTAACAAACGTTGGTGAAGAGGATGAAACATTGTACTCCCCTGTTGTCGATGCTCCCATTGGGTAA
Predicted protein sequences of Glyma04g02431
>Glyma04g02431.1   sequence type=predicted peptide   gene model=Glyma04g02431   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MILILIRKIIGARHYPDPQGDSEYETPRDKNGHGTHVASTAAGATVPGASYYGVAAGTAQSGSPKSLLAIYKVCFKYECPGSAVLAAFDDAIADGVDVISLSVASLSELKYNPIAIGAFHAVERGILVVASAGNNGPSLNTVVKDYPLIYSESAQAKDAKLSDARQCFPYSLDKVKGKIVVCDGKDHSCNYFKSSGCARVSVIDFKPAPMMPSFAAKGPSAISKNILKPEITAPGVNILAAWIGNDKEGVPKGKKPSQFNIKSGTSMACSHVSGLAATIKSQNPTWSASAIKSATMATVTQENNLKAPITTDKGSVATPYDYGAGQMTIYGAFHPGLVYETNTIDYLNYLCYVGFNITLVKTISRNAPNNLSCPKHSSSHHISNINYPSIAISDLKGKELVDVNITVTNVGEEDETLYSPVVDAPIG*






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