Report for Sequence Feature Glyma04g02180
Feature Type: gene_model
Chromosome: Gm04
Start: 1493363
stop: 1499617
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g02180
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G76140 AT
Annotation by Michelle Graham. TAIR10: Prolyl oligopeptidase family protein | chr1:28571187-28574852 FORWARD LENGTH=795
SoyBase E_val: 0 ISS
GO:0006508 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteolysis
SoyBase N/A ISS
GO:0030244 GO-bp
Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process
SoyBase N/A ISS
GO:0048193 GO-bp
Annotation by Michelle Graham. GO Biological Process: Golgi vesicle transport
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0004252 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity
SoyBase N/A ISS
GO:0008236 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type peptidase activity
SoyBase N/A ISS
GO:0070008 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type exopeptidase activity
SoyBase N/A ISS
KOG2237
KOG
Predicted serine protease
JGI ISS
PTHR11757 Panther
PROTEASE FAMILY S9A OLIGOPEPTIDASE
JGI ISS
PTHR11757:SF2 Panther
PROLYL ENDOPEPTIDASE (PROLYL OLIGOPEPTIDASE)
JGI ISS
PF00326 PFAM
Prolyl oligopeptidase family
JGI ISS
PF02897 PFAM
Prolyl oligopeptidase, N-terminal beta-propeller domain
JGI ISS
UniRef100_E5GCD4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Serine-type endopeptidase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD4_CUCME
SoyBase E_val: 0 ISS
UniRef100_I1JSY1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JSY1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g02180
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma04g02180 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g019700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g02180
Coding sequences of Glyma04g02180
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g02180.2 sequence type=CDS gene model=Glyma04g02180 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCGCTTTGTGCCCTAAACTATCCTCCTGCTCGCAGAGACGATTCAGTCGTCGAAGATTACCATGGTGTCAAAATTGCCGATCCTTATCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTAGCGAAACAGGTTCAGCTGACGGATTCGGTTCTTCAAAAATGCGAAACGAGAGGGAAGCTTAGGGAAACGATAACGAAGCTATTTGACCATCCTCGTTACGACGCTCCGTTTAGGCGAGCCAATAAGTACTTTTACTTCCATAACACTGGCCTTCAGCCGCAAAACATTCTATATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGCTTTGCTCGATCCCAATACCTTCAGTGAAGACGGAACCGTTTCCCTGAGCACACTTTCGGTGAGCGAAGATGCCAAGTACTTGGCTTATGCGCTTAGTTCAAGTGGTAGCGATTGGACTACTATAAAAGTAATGCGGATTGAGGACCGGAATGTTGAGCCTGATACCTTATCGTGGGTCAAGTTTTCCTCAATTAGTTGGACGCACGATGGCAAAGGTTTCTTTTATAGCCGCTATCCAGCACCCAAAGATGGAGAAGTAGTAGATGCTGGTACTGAAACAAATGCTAACCTTCATCATCAGCTCTATTATCATTTTCTGGGTACAGATCAATCGGAAGATATTTTGTGCTGGAGAGATCCTGAAAATCCTAAATATACGTTTGGAGGAAGTGTAACTGATGATGGCAAGTACATCCTTCTCCATATTGCAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGCGACTTGTCCAAACTTCCTAATGCGCTGGAAGGCTTTCGGAATGGAAATTCTCTCCTCCCATTTGCCAAACTTATTGATAACTTTGATGCACAGTATGAAGCCATTGCCAATGATGACACCGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAAATAGTCCGAGTAGATTTGAAAGAACCAACTGCTTGGGCTGATGTTCTCCAAGAGTCTGAAAAAGATGTACTGGAGTCAGCATGTGCTGTAAATGGCAACCAACTGATAGTAAGTTACTTGAGTGATGTGAAGTATCTTCTACAAGTAAGAGACTTAAAAACAGGATCCTTGCTGCATCAATTACCAATTGAGATTGGCAGTGTTTCTGAAATTTCTGCACGACGTGAAGATAGTGTGGTTTTCATTGGCTTTACAAGCTTCTTAACTCCCGGTATCATCTACCAGTGCAACCTAGGAACAGAGATTCCTGATATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGATCGGTCTGAATTTCATGTTAAACAGGATTTCGTGACTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAAAAAGGATATTACTTTGGATGGTTCACACCCATGTTTGTTATATGGATATGGTGGTTTTAACATCAATATTACGCCATATTTCAGTGTCAGTCGCATTGTACTCACAAGACATTTAGGTGTTGTTTTCAGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCAAGAAAGCAGAATTGCTTTGATGACTTCATTTCTGCTGCTGAATACCTTGTATCTACTGGTTACACTCAACCCAAAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCTGATTTATTTGGCTGTGCTCTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCTTGGACCTCTGATTATGGTTGTTCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAATACTCACCATTACATAATGTCCGGAGACCGTGGGAACAGCATCATGATCAGTCATTTCAGTATCCATCAACCATGCTGTTGACAGCTGATCATGATGATCGTGTTGTGCCACTGCACACATTGAAGCTATTAGCGACCATGCAATATGTCCTCTGTACGAGCTTGGAAAAAAGTCCCCAGACAAACGCTATAATTGGTCGCATTGACTGCAAGTCTGGTCATGGAGCTGGTCGTCCAACACAGAAAATGATCGATGAAGCTGCTGACCGGTACGGTTTTATGGCTAAAGTGTTGGAAGTGCATTGGATTGAATAG
Predicted protein sequences of Glyma04g02180
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g02180.2 sequence type=predicted peptide gene model=Glyma04g02180 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASLCALNYPPARRDDSVVEDYHGVKIADPYRWLEDPDAEEVKEFVAKQVQLTDSVLQKCETRGKLRETITKLFDHPRYDAPFRRANKYFYFHNTGLQPQNILYVQESLEGEAEALLDPNTFSEDGTVSLSTLSVSEDAKYLAYALSSSGSDWTTIKVMRIEDRNVEPDTLSWVKFSSISWTHDGKGFFYSRYPAPKDGEVVDAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYTFGGSVTDDGKYILLHIAEGCDPVNKLYYCDLSKLPNALEGFRNGNSLLPFAKLIDNFDAQYEAIANDDTVFTFLTNKDAPKYKIVRVDLKEPTAWADVLQESEKDVLESACAVNGNQLIVSYLSDVKYLLQVRDLKTGSLLHQLPIEIGSVSEISARREDSVVFIGFTSFLTPGIIYQCNLGTEIPDMKIFREIVVPGFDRSEFHVKQDFVTSKDGTKIPMFIVAKKDITLDGSHPCLLYGYGGFNINITPYFSVSRIVLTRHLGVVFSIANIRGGGEYGEEWHKAGSLARKQNCFDDFISAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEQHHDQSFQYPSTMLLTADHDDRVVPLHTLKLLATMQYVLCTSLEKSPQTNAIIGRIDCKSGHGAGRPTQKMIDEAADRYGFMAKVLEVHWIE*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
