|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G76140 | AT | Annotation by Michelle Graham. TAIR10: Prolyl oligopeptidase family protein | chr1:28571187-28574852 FORWARD LENGTH=795 | SoyBase | E_val: 0 | ISS |
GO:0006508 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteolysis | SoyBase | N/A | ISS |
GO:0030244 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cellulose biosynthetic process | SoyBase | N/A | ISS |
GO:0048193 | GO-bp | Annotation by Michelle Graham. GO Biological Process: Golgi vesicle transport | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0004252 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type endopeptidase activity | SoyBase | N/A | ISS |
GO:0008236 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type peptidase activity | SoyBase | N/A | ISS |
GO:0070008 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: serine-type exopeptidase activity | SoyBase | N/A | ISS |
KOG2237 | KOG | Predicted serine protease | JGI | ISS | |
PTHR11757 | Panther | PROTEASE FAMILY S9A OLIGOPEPTIDASE | JGI | ISS | |
PTHR11757:SF2 | Panther | PROLYL ENDOPEPTIDASE (PROLYL OLIGOPEPTIDASE) | JGI | ISS | |
PF00326 | PFAM | Prolyl oligopeptidase family | JGI | ISS | |
PF02897 | PFAM | Prolyl oligopeptidase, N-terminal beta-propeller domain | JGI | ISS | |
UniRef100_E5GCD4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Serine-type endopeptidase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD4_CUCME | SoyBase | E_val: 0 | ISS |
UniRef100_I1JSY1 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JSY1_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma04g02180 not represented in the dataset |
Glyma04g02180 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.04g019700 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma04g02180.2 sequence type=CDS gene model=Glyma04g02180 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTTCGCTTTGTGCCCTAAACTATCCTCCTGCTCGCAGAGACGATTCAGTCGTCGAAGATTACCATGGTGTCAAAATTGCCGATCCTTATCGATGGCTCGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTCGTAGCGAAACAGGTTCAGCTGACGGATTCGGTTCTTCAAAAATGCGAAACGAGAGGGAAGCTTAGGGAAACGATAACGAAGCTATTTGACCATCCTCGTTACGACGCTCCGTTTAGGCGAGCCAATAAGTACTTTTACTTCCATAACACTGGCCTTCAGCCGCAAAACATTCTATATGTGCAGGAGAGTTTGGAGGGAGAGGCAGAGGCTTTGCTCGATCCCAATACCTTCAGTGAAGACGGAACCGTTTCCCTGAGCACACTTTCGGTGAGCGAAGATGCCAAGTACTTGGCTTATGCGCTTAGTTCAAGTGGTAGCGATTGGACTACTATAAAAGTAATGCGGATTGAGGACCGGAATGTTGAGCCTGATACCTTATCGTGGGTCAAGTTTTCCTCAATTAGTTGGACGCACGATGGCAAAGGTTTCTTTTATAGCCGCTATCCAGCACCCAAAGATGGAGAAGTAGTAGATGCTGGTACTGAAACAAATGCTAACCTTCATCATCAGCTCTATTATCATTTTCTGGGTACAGATCAATCGGAAGATATTTTGTGCTGGAGAGATCCTGAAAATCCTAAATATACGTTTGGAGGAAGTGTAACTGATGATGGCAAGTACATCCTTCTCCATATTGCAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGCGACTTGTCCAAACTTCCTAATGCGCTGGAAGGCTTTCGGAATGGAAATTCTCTCCTCCCATTTGCCAAACTTATTGATAACTTTGATGCACAGTATGAAGCCATTGCCAATGATGACACCGTGTTTACATTTTTAACTAATAAAGATGCTCCAAAATATAAAATAGTCCGAGTAGATTTGAAAGAACCAACTGCTTGGGCTGATGTTCTCCAAGAGTCTGAAAAAGATGTACTGGAGTCAGCATGTGCTGTAAATGGCAACCAACTGATAGTAAGTTACTTGAGTGATGTGAAGTATCTTCTACAAGTAAGAGACTTAAAAACAGGATCCTTGCTGCATCAATTACCAATTGAGATTGGCAGTGTTTCTGAAATTTCTGCACGACGTGAAGATAGTGTGGTTTTCATTGGCTTTACAAGCTTCTTAACTCCCGGTATCATCTACCAGTGCAACCTAGGAACAGAGATTCCTGATATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGATCGGTCTGAATTTCATGTTAAACAGGATTTCGTGACTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAAAAAGGATATTACTTTGGATGGTTCACACCCATGTTTGTTATATGGATATGGTGGTTTTAACATCAATATTACGCCATATTTCAGTGTCAGTCGCATTGTACTCACAAGACATTTAGGTGTTGTTTTCAGCATAGCAAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCAAGAAAGCAGAATTGCTTTGATGACTTCATTTCTGCTGCTGAATACCTTGTATCTACTGGTTACACTCAACCCAAAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCTGATTTATTTGGCTGTGCTCTGGCTCATGTTGGTGTTATGGACATGCTACGGTTCCACAAATTTACCATAGGTCATGCTTGGACCTCTGATTATGGTTGTTCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAATACTCACCATTACATAATGTCCGGAGACCGTGGGAACAGCATCATGATCAGTCATTTCAGTATCCATCAACCATGCTGTTGACAGCTGATCATGATGATCGTGTTGTGCCACTGCACACATTGAAGCTATTAGCGACCATGCAATATGTCCTCTGTACGAGCTTGGAAAAAAGTCCCCAGACAAACGCTATAATTGGTCGCATTGACTGCAAGTCTGGTCATGGAGCTGGTCGTCCAACACAGAAAATGATCGATGAAGCTGCTGACCGGTACGGTTTTATGGCTAAAGTGTTGGAAGTGCATTGGATTGAATAG
>Glyma04g02180.2 sequence type=predicted peptide gene model=Glyma04g02180 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MASLCALNYPPARRDDSVVEDYHGVKIADPYRWLEDPDAEEVKEFVAKQVQLTDSVLQKCETRGKLRETITKLFDHPRYDAPFRRANKYFYFHNTGLQPQNILYVQESLEGEAEALLDPNTFSEDGTVSLSTLSVSEDAKYLAYALSSSGSDWTTIKVMRIEDRNVEPDTLSWVKFSSISWTHDGKGFFYSRYPAPKDGEVVDAGTETNANLHHQLYYHFLGTDQSEDILCWRDPENPKYTFGGSVTDDGKYILLHIAEGCDPVNKLYYCDLSKLPNALEGFRNGNSLLPFAKLIDNFDAQYEAIANDDTVFTFLTNKDAPKYKIVRVDLKEPTAWADVLQESEKDVLESACAVNGNQLIVSYLSDVKYLLQVRDLKTGSLLHQLPIEIGSVSEISARREDSVVFIGFTSFLTPGIIYQCNLGTEIPDMKIFREIVVPGFDRSEFHVKQDFVTSKDGTKIPMFIVAKKDITLDGSHPCLLYGYGGFNINITPYFSVSRIVLTRHLGVVFSIANIRGGGEYGEEWHKAGSLARKQNCFDDFISAAEYLVSTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEQHHDQSFQYPSTMLLTADHDDRVVPLHTLKLLATMQYVLCTSLEKSPQTNAIIGRIDCKSGHGAGRPTQKMIDEAADRYGFMAKVLEVHWIE*
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