SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G54570 | AT | Annotation by Michelle Graham. TAIR10: Esterase/lipase/thioesterase family protein | chr1:20380649-20384953 REVERSE LENGTH=704 | SoyBase | E_val: 3.00E-126 | ISS |
| GO:0019432 | GO-bp | Annotation by Michelle Graham. GO Biological Process: triglyceride biosynthetic process | SoyBase | N/A | ISS |
| GO:0033306 | GO-bp | Annotation by Michelle Graham. GO Biological Process: phytol metabolic process | SoyBase | N/A | ISS |
| GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0010287 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plastoglobule | SoyBase | N/A | ISS |
| GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
| GO:0004144 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: diacylglycerol O-acyltransferase activity | SoyBase | N/A | ISS |
| PTHR22753 | Panther | FAMILY NOT NAMED | JGI | ISS | |
| PTHR22753:SF5 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF03982 | PFAM | Diacylglycerol acyltransferase | JGI | ISS | |
| UniRef100_G7L0R8 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Acyltransferase-like protein n=1 Tax=Medicago truncatula RepID=G7L0R8_MEDTR | SoyBase | E_val: 9.00E-171 | ISS |
| UniRef100_I1JRJ7 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1JRJ7_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma03g40344 not represented in the dataset |
Glyma03g40344 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma03g40344.1 sequence type=CDS gene model=Glyma03g40344 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTATGGCAGATCATTTCGTTCTGTTACTGGATCTGTATTTTTCTCAACATTGGAGGATGGAAAGATTACAAAAGGTCTCTCTGGTGTTCCAGATGAAGGTCCTGTCTTATATGTTGGTTATCACATGTTGTTGGGGTTAGAGCTTATCTCACTCACAGATGGATTTTTAAGTGAGAAGGGTATTGTGCTTCGTGGAATAGCCCATCCCGAGCTGTTCAGGCCTAAAGTTGAGTCTTGGTCTTCTGAGTTTTCTATGATTGATTGGGTGAAGATATTTGGTGGGGTGCCTGTTTCAGCAAGCAATATTTTCAAATTGCTTTCAACAAAGTCACATGTTCTCCTATATCCTGGTGGTGCGCGTGAGGCTCTCCATTATAAGGGGGAAGCATACAAGTTGACTTGGCCTGATCACCCAGAATTTGTGAGAATGGCAGCACGATTTGGTGCCACAATTGTGCCATTTGGAGCTGTAGGTGAAGATGATTTAGCTGAATTAGTTCTTGACTACAACGACTTAATGAAGATCCCCATAGTCAACGATCGTATAAGAAATATGAATCGTGACTCAGTTAAGTTTAGAGATGAAACAAGTGGCGAGGTGGCAAACCAAAATCTCACTTTTCCAGTGCTTCTACCAAAGATACCAGGTCGCTTTTACTTTCTATTTGGGAAGCCCATAAAAACAAAAGGCATGGATAAGATTCTAAAAGACAGAGAAAGTGCCAACCAAATGTACCTTGAGATTAAGTCAGAAGTTGAACACAATTTAAATTACTTGATCAAGAAGAGGGAGGAGGATCCATACAGGAACTTCGTCGATAGGAAAATGTATCAGATATTTTATCCTCACGAAACTGATCCAACGCCATCATTTAAGCCCTGA
>Glyma03g40344.1 sequence type=predicted peptide gene model=Glyma03g40344 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MYGRSFRSVTGSVFFSTLEDGKITKGLSGVPDEGPVLYVGYHMLLGLELISLTDGFLSEKGIVLRGIAHPELFRPKVESWSSEFSMIDWVKIFGGVPVSASNIFKLLSTKSHVLLYPGGAREALHYKGEAYKLTWPDHPEFVRMAARFGATIVPFGAVGEDDLAELVLDYNDLMKIPIVNDRIRNMNRDSVKFRDETSGEVANQNLTFPVLLPKIPGRFYFLFGKPIKTKGMDKILKDRESANQMYLEIKSEVEHNLNYLIKKREEDPYRNFVDRKMYQIFYPHETDPTPSFKP*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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