Glyma03g37331 - SoyBase

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Report for Sequence Feature Glyma03g37331

Feature Type:	gene_model
Chromosome:	Gm03
Start:	43983672
stop:	43986601
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma03g37331

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G02350	AT	Annotation by Michelle Graham. TAIR10: exocyst complex component sec15B \| chr4:1038157-1040571 FORWARD LENGTH=787	SoyBase	E_val: 0	ISS
GO:0000902	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell morphogenesis	SoyBase	N/A	ISS
GO:0006623	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein targeting to vacuole	SoyBase	N/A	ISS
GO:0006904	GO-bp	Annotation by Michelle Graham. GO Biological Process: vesicle docking involved in exocytosis	SoyBase	N/A	ISS
GO:0007033	GO-bp	Annotation by Michelle Graham. GO Biological Process: vacuole organization	SoyBase	N/A	ISS
GO:0009846	GO-bp	Annotation by Michelle Graham. GO Biological Process: pollen germination	SoyBase	N/A	ISS
GO:0009860	GO-bp	Annotation by Michelle Graham. GO Biological Process: pollen tube growth	SoyBase	N/A	ISS
GO:0016049	GO-bp	Annotation by Michelle Graham. GO Biological Process: cell growth	SoyBase	N/A	ISS
GO:0048193	GO-bp	Annotation by Michelle Graham. GO Biological Process: Golgi vesicle transport	SoyBase	N/A	ISS
GO:0000145	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: exocyst	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0009506	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
KOG2176	KOG	Exocyst complex, subunit SEC15	JGI		ISS
PTHR12702	Panther	SEC15	JGI		ISS
PF04091	PFAM	Exocyst complex subunit Sec15-like	JGI		ISS
UniRef100_B9SAT6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Sec15, putative n=1 Tax=Ricinus communis RepID=B9SAT6_RICCO	SoyBase	E_val: 0	ISS
UniRef100_I1M637	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1M637_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma03g37331

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g37331 not represented in the dataset	Glyma03g37331 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g37331 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g215200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma03g37331

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma03g37331

Limit To All Plant Sequences

>Glyma03g37331.1   sequence type=CDS   gene model=Glyma03g37331   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTCTCATCCAAACCTCCGCGCCGGAAAGTTGTTCCGGCGAACGGCGATGACTCCGCCGACAAACTCGACCAGCTCCTCCTCTCCTCTGCCATCTCCAACAACGAGGACCTAGGCCCGTTCATCCGCAAGGCCTTCACCTCCGGCAAGCCGGAAACGCTCCACCACCACCTCCGCCACTTCGCGCGGTCGAAGGAGTCAGAGATCGAAGAGGTGTGCAAGGCTCACTACCAGGACTTCATCCTCGCCGTCGACGACCTCCGATCCCTCCTCTCCGACGTCGATTCACTCAAGTCCTCCCTCTCCGACTCCAACTCGCGCCTCCAGCACGTCGCGCGCCCTCTCCTCTCCTCGCTCGATGCCTTCGTCGAGACGCGCAACGTCTCCAAGAACGTCAACCTCGCCATCGACTCCGTCCGCACGTGCGTCAAGCTCATGGAGGTCTGCACACGCGCCAACCGCCACCTTGCCGACGACAACTTCTACATGGCGCTCAAGTGCGTCGACGCGATCGAGCGCGAGTACTTGGACCAAACGGCGTCGTCCACGCTGAGGCGGATGCTGGAAAAGAAGATTCCGGAGATTCGGTCCTACATCGAGAGGAAGGTGAACAAGGAGTTCGGTGACTGGTTGGTGGAGATCCGTGTCGTGAGTCGCAATTTAGGTCAATTGGCGATAGGTCAAGCCTCGGCGGCGAGGCAGAGAGAAGAAGACCTAAGAATTAAGCAGCGCCAAGCGGAGGAACAGAGTAGGCTCAGCGTGAGGGACTGTATTTATGCATTGGAGGAAGAGGATGAAGACGGAATCATCGCCGGCGGGATCGGAGAAGACGGCGGTGGAGCCGCCGGGTTTGATTTGACTTCTCTGTGTAGAGCGTATCATATTCACCAGACTTTAGGGTTAGAGGATCGGTTTAAGCAGTATTATTTTGAGAACAGGAAGCTTCAGTTGACTTCGGATTTTCAGGTTTCGTCGATGACTCCTTTTCTGGAGTCTCATCAAACGTTCTTTGCGCAGATTGCAGGGTTCTTCGTGGTGGAGGATCGTGTTTTGAGGGCCGGGGGTGGGTTGATTTCGAAAATGGAAGTTGAGAACCTTTGGGATATTGCTGTTAGTAAAATGTGTTCTGTGTTGGAGGATCAGTTCTCTAGAATGCAAACTGCCAATCATTTATTGCTTATTAAGGATTATGTGAGTCTGTTAGGAGTGACGCTGCGGAGATATGGGTATCCCATTGATGCGTTGCTTGATGTTTTGAGCAAACATAGGGATAAGTACCATGAGTTGCTTTTGTCTGACTGTAGGAAGCTGATTGCGGAGGCAGTTGCGGCTGATAAATTTGAGCAGATGTTGATGAAGAAGGAGTATGAGTATTCCATGAATGTGCTTTCTTTCCAGATACAGACTTCGGATATCATACCTGCTTTTCCCTATGTGGCGCCATTTTCGTCCACTGTGCCAGATTGTTGTAGGATTGTGCGGTCCTTCATTGAGGATTCTGTGAGTTTCATGTCATATGGAGGGCAGCTTGAGTTCTATGAAGTTGTTAAGAAGTATTTAGACAGGCTTTTGAGTGAGGTTTTGGATGAAGCTTTAGTGAAGCTTATCAATACATCAATTAATGGGGTTTCCCAGGCAATGCAGATGGCAGCGAATATGGCTGTCTTGGAGCGTGCTTGTGATTTCTTCTTTCGCCATGCTGCACAGCTTTCAGGTGTTCCCTTGAGAATGGTGGAGAGAAGCAGAAGGAACTTCCCTCTAAGAAAAGCTCGTGATGCTGCTGAAGAGATGCTCTCTGGGCTACTCAAAGCCAAAGTTGATGGATTTATGACATTGATCGAGAATGTAAATTGGATGGGTGACGAGGCACCTCAGAGTGGAAATGAATATGTAAACGAGGTCATAATTTATTTGGAAATTTTGGTTTCAACTGCTCAACAGATATTGCCTTCTCAAGTCCTTAAGAGAGTATTACAGGAAGTTTTTGCTCACATATCGGAGAAGATAGTTGGGACTTTAGTTAGTGATTCTGTTAAGAGGTTTAATGTAAATGCTATTACTGGAATTGAAGTTGACATCCGGCTCTTAGAATCATTTGCTGATAATCAGGCCTCCCTTTTCTCTGATGGGGATGTTGATGTTCTGAGAGCATCACTTGCCGGCTCAAAGCAACTGATTAATTTGCTGTTAAGCAATCATCCAGAGAACTTCTTGAATCCAGTGATCAGGGAGAGGAGTTACAATACTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAGGGATCCTTCCGATCGGCTCTTTGGAACCTTTGGTAGTCGTGGGGCGAGGCAGAATCCCAAAAGGAAATCATTGGATACATTGATAAAAAGACTTAGGGATGTTAGCTGA

Predicted protein sequences of Glyma03g37331

Limit To All Plant Sequences

>Glyma03g37331.1   sequence type=predicted peptide   gene model=Glyma03g37331   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLSSKPPRRKVVPANGDDSADKLDQLLLSSAISNNEDLGPFIRKAFTSGKPETLHHHLRHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVDSLKSSLSDSNSRLQHVARPLLSSLDAFVETRNVSKNVNLAIDSVRTCVKLMEVCTRANRHLADDNFYMALKCVDAIEREYLDQTASSTLRRMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASAARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGIIAGGIGEDGGGAAGFDLTSLCRAYHIHQTLGLEDRFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRAGGGLISKMEVENLWDIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRYGYPIDALLDVLSKHRDKYHELLLSDCRKLIAEAVAADKFEQMLMKKEYEYSMNVLSFQIQTSDIIPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYEVVKKYLDRLLSEVLDEALVKLINTSINGVSQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRNFPLRKARDAAEEMLSGLLKAKVDGFMTLIENVNWMGDEAPQSGNEYVNEVIIYLEILVSTAQQILPSQVLKRVLQEVFAHISEKIVGTLVSDSVKRFNVNAITGIEVDIRLLESFADNQASLFSDGDVDVLRASLAGSKQLINLLLSNHPENFLNPVIRERSYNTLDHKKVVIVSEKLRDPSDRLFGTFGSRGARQNPKRKSLDTLIKRLRDVS*

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