Report for Sequence Feature Glyma03g36530
Feature Type: gene_model
Chromosome: Gm03
Start: 43470496
stop: 43472700
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g36530
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G06610 AT
Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF620) | chr5:2029953-2033620 FORWARD LENGTH=368
SoyBase E_val: 7.00E-154 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF04788 PFAM
Protein of unknown function (DUF620)
JGI ISS
UniRef100_I1JQE8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JQE8_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q9FG09 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Gb|AAD30234.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FG09_ARATH
SoyBase E_val: 3.00E-151 ISS
Expression Patterns of Glyma03g36530
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma03g36530
Paralog Evidence Comments
Glyma19g39190 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma03g36530 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.03g207100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma03g36530
Coding sequences of Glyma03g36530
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g36530.1 sequence type=CDS gene model=Glyma03g36530 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGTCGTCTTGCCACATTATCAGAAGAACCCATCAACGACCAAGACATCAACTACAACAAGAGAAACAGCTCCTCAGGCTCAAAAAAATGGCCAAACTGGAACTGGATCAAGACCCACTTCTTCCACAAGAAGCCCGACCTCAAGATTCTCCTCAGCGTCCTCGCATGCCCTCTCTTCCCCGTCCCTCTCCACACCCAACCGGACCCACCACCCCTCAACCAGCTTTCCTCCTCCGCTCAGTATATTATCCAGCACTTCACCGCCGCCACCGGCTGCCGGAAGCTGGAGGGTACGGTGAAGAATGTGTTTGCCACCGGGAAGGTGGAAATGTGGGCAGTGGATGAGGTCGGAAACACCGGAGTCTCCGAGAGAGGCTGCTTTGTCATATGGCAGATGCTCCCCGACAAGTGGCAGATTGAGCTTGCTGTCGCCGGTCACAAGGTTGTCGCCGGTAGTGACGGCGCCGTCGCCTGGCGCCACACCCCTTGGCTCGGAACGCACGCCGCTAAAGGTGGCATCCGCCCTCTTCGACGCGCTGTTCAGGGACTGGACCCTTTGGCAGTGTCTGCAGTATTCTCTGCTGCGCAATACATGGGAGAGAAACAAATCTCAGGCATCGATTGCTTCGTTCTAAAGCTGTCACCTGATCAGAAGGACCTCGTTGACCGAAGTGACAACACTGCTGAAATGATCAAGCACGTTGCATTTGGCTACTTCAGCCAGAGAAACGGGCTTCTGGTGCACCTAGAGGACTCTTACCTTACTAGAATCCAATCCCCTGGGACACACCCCACTTATTGGGAGACCACTATGTCAACGAAAATTGAGGATTACAAAATGGTGGATGGTGTGATGATTGCACATGCTGGCCATTCAACCGTGATCATCACAAGGTTTGGAGACAATCTTAAAACAGGACCTGCCATCACACGGTTGGAAGAATCATGGACCATTGATGATGTTGCGTTCAATGTTCAAGGCCTTTCCATGGACTGCTTCATACCCCCTAAGGAACTCCACAAGGATTACCCACAAGAAGATCTAGATTGGAGATCACCCTTGCATAGATGA
Predicted protein sequences of Glyma03g36530
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g36530.1 sequence type=predicted peptide gene model=Glyma03g36530 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGRLATLSEEPINDQDINYNKRNSSSGSKKWPNWNWIKTHFFHKKPDLKILLSVLACPLFPVPLHTQPDPPPLNQLSSSAQYIIQHFTAATGCRKLEGTVKNVFATGKVEMWAVDEVGNTGVSERGCFVIWQMLPDKWQIELAVAGHKVVAGSDGAVAWRHTPWLGTHAAKGGIRPLRRAVQGLDPLAVSAVFSAAQYMGEKQISGIDCFVLKLSPDQKDLVDRSDNTAEMIKHVAFGYFSQRNGLLVHLEDSYLTRIQSPGTHPTYWETTMSTKIEDYKMVDGVMIAHAGHSTVIITRFGDNLKTGPAITRLEESWTIDDVAFNVQGLSMDCFIPPKELHKDYPQEDLDWRSPLHR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
