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Report for Sequence Feature Glyma03g36191

Feature Type:gene_model
Chromosome:Gm03
Start:43198446
stop:43202712
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G11760AT Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:3718529-3721123 FORWARD LENGTH=702 SoyBaseE_val: 0ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I1JQA5UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JQA5_SOYBN SoyBaseE_val: 0ISS
UniRef100_Q9SF22UniRef Annotation by Michelle Graham. Most informative UniRef hit: F26K24.5 protein n=2 Tax=Arabidopsis thaliana RepID=Q9SF22_ARATH SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g36191 not represented in the dataset

Glyma03g36191 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

ParalogEvidenceComments
Glyma19g38830 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding NameAnnotation VersionEvidenceComments
Glyma.03g203600 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma03g36191.2   sequence type=transcript   gene model=Glyma03g36191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCAAGATTCTCCCGCAGATCGATAGAACGGATATGCTACTAGTTAGATAAAAATATATAAAAAAAAATGTAAATGTAATGTCTTGCATATCACGGAGAAAGGATAATCTATATTAATCTTGTAACAACTTACAAGTGAAAAAAAAAAAAAAAACAAGATAGAGTTGAGTCAACCACTGCTTATCATATCATATGACGTGGTTACTGATTTAACCTTAATCCGTTCAAAGTAGTAACGAGTAACAACCAAACCAACAAACCCCTAACTCTCTTAACCCCAAAGCACACGGTTTGTAACCCAAGTTAACTTGTTAGAGCCACCCACGCTTTCTCTGTCTCTCTCTTCTTATAACAAGTCTCTAACTAACGGCATATTCTCTTTCTCTCTCCATGCCGCAGCGCATGCTTTGATCGACCAAGTCACCTCTCTCGCATTCTTCGTAGTTCCAAGATCCGAACTCCGAGATTCCGACTCTGAGAAAACGAGTAATGGTGGTGAAGATGATGAGGTGGCGGCCATGGCCGCCTCTCCTCTCGAAGAAGTTCCAAGTGAGGCTGCTCGTGCGGAGGCTCCAGGGCTGCGATCTGCTGCGGAACGCTGCACGTGAAGGTTCCAAATTGGTTCTTGAGATTCGCTGGAAGGGTCCTAAGTTGACCCTTGGCTCTCTGCGACGGAGCTCCGTCGCGAGAAACTTTACTAAAGAGGCGGAATTTGACGTCGACGGCGGTGGCGCCGCCGTGGTTCACTGGGACGAGGAGTTTCCGACGTTGTGCAATTTGAACGGTTACAAAGACAATGTTTTTCACCCTTGGGAGATCGCTTTCACTCTCTTTAATGGATTGAATCAGAGGCCGAAAAACAAGGTTCCTGCAATTGGAACCGCATTATTGAATATTGCTGAATTTGCATCTTCAACTGATCAAAATGATTTTGATTTAAACATTCCACTCACACTAACTGGAGGTTCTGGGGAGCTTTCTCCTTTACTCTGTATATCAATAAGCTTGACGGAGGTAAGCGTAGCTCAAGAAAGCGTGGAGCCAATTCAGAGATCTATAGTGCCTGGGCCATCGCCCTCCGCCAAGTCGGGAGAAACAGCCTTGGTAGAAAAAGATGAGCTTTCTGCTATTAAAGCTGGTATTAGGAAAGTAATGATTTTGACGGAGTTTGTATCTTCCAAGAAATCAAAAAAGGGATGTCGTGAGGAAGAAGGAAGTGAAGGTAGGTGCTCTAGAAGTGAGGATGGTGAATACAATTATCCTTTGGATTCTGAGTCAATTGATGATTCTGAGGAAGGTGAAACAGATGAGGGGAAGGAGGATTCCAGCATTAGGAAGTCATTCAGTTATGGAACACTGGCCTCTGCAAATGCTGGGGGATTTTTTCATTCCAATATGAGAGTAAATTGTAATGATGAAGACTGGGTTTATTACAGCCATCGAAAGTCTGATGTTGGGTGTTCACGGATGGAGGATTCTACAACTTCTTCTTCTGATCCATATTTACAAAGTTCTAAGCGCAGCATACTTCCATGGAGGAAGAGGAAGTTGAGTTTCAGATCTCCTAAAGCTTATAAGGGAGAGCCGTTGCTAAAGAAGTCATATGCAGAAGAAGGTGGTGATGACATAGATTTTGATCGCCGTCAACTTAGCTCCGATGAATCCCTTTCTTTGACTTGGTACAAGACTGAGGATGACTTGTCTGCACATCGATCGTCAATCTCTGAATTTGGGGATGGCAGTTTTGCTGTAGGGAGTTGGGAGCAGAAAGAAGTCATGAGTCGTGATGGTCATATGAAGCTTCAAACACAGGTCTTCTTTGCTTCAATTGATCAACGCAGTGAACGTGCAGCAGGTGAGAGTGCATGTACAGCTCTTGTTGCTGTGATTGCTGACTGGTTTCAAAATAATCGTGATCTTATGCCCATAAAGTCGCAGTTTGATAGTCTAATTAGAGAAGGCTCCTCAGAATGGAGGAACCTATGTGAAAATGATGCCTATAGAGAGCGGTTCCCTGACAAGCATTTTGACCTGGAAACAGTCATTCAAGCAAAAATACGTCCGCTTACTGTGGCTCCTGGGAAGTCCTTCATTGGTTTTTTTCATCCTGAAGGGATGGATGAAGGCAGATTTGACTTTCTGTATGGTGCCATGTCTTTTGATAATATTTGGGATGAGATTAGTCGTGCTGGACAAGAGTGCCCTAGCAATGGTGAACCTCACATTTATGTTGTTAGTTGGAAGATCATTTTTTCATCCTCAAAGTTGAATATGATTGTTATTACATCATTGACACTTTGGGAGAGAGACTTTATGAAGGGTGCAACCAGGCATATATCTTGAAATTTGACAGCAACACAATGATGTACAAAATGCCAAATGTTGCTCATTCATCAGATAACAAGACATCCAATGACCAGCAAACTGTAGCAGAAATATTAGATCCTAATAATAGTCAAACCCAACAAGTAAATAGCAAGGAGGTGGATTCTGTTGCAGGGGAGGAAGAACAGTTGAGGAGTGAGACAGAAGAAGTTATATGCAGAGGGAAGGAAGCATGCAAAGAGTACATTAAAAGCTTCCTAGCTGCAATCCCTATCAGAGAATTGGAAGCAGATGCCAAGAAAGGCCTCATTTCTTCAGCATCCCTTTACCATAGACTACTACAAATTGAGTTTCATTACACCCAATTGTTAGGTGAAACATCAATGGCTGAACCAGAGACCTTAGCTCTTGCAATAACTGAGGCTTCTACCATAACCAAGCTGTAAATTGAAGAAAATGCGTCTATGCTAACTTATTTTACTACTTTAACCATTGATGTTCTTCTGATTTTGAACTGAATTTAATTATAACATATGGAGGCTCGTATAAGCTTTTGGTGCGAGCAAATGAGTGAGCTGAGCTTTTATTTGCGCAGTTCTGTTTGGCACTTGCCTTGTTTTATATTTACCTGTAATCTTTCTTGGGAAGGTTATTCTGTAAATGGCTATGTAGTTTCCTTTTCAAGTCAGTGCATACGTTTGGCATCTGAAATGTAAGTTCTAAACAGATTCTACTCTTAAATGGCAGATAGCTTTTAGTTTTTACGGACACC

>Glyma03g36191.1   sequence type=CDS   gene model=Glyma03g36191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGGTGAAGATGATGAGGTGGCGGCCATGGCCGCCTCTCCTCTCGAAGAAGTTCCAAGTGAGGCTGCTCGTGCGGAGGCTCCAGGGCTGCGATCTGCTGCGGAACGCTGCACGTGAAGGTTCCAAATTGGTTCTTGAGATTCGCTGGAAGGGTCCTAAGTTGACCCTTGGCTCTCTGCGACGGAGCTCCGTCGCGAGAAACTTTACTAAAGAGGCGGAATTTGACGTCGACGGCGGTGGCGCCGCCGTGGTTCACTGGGACGAGGAGTTTCCGACGTTGTGCAATTTGAACGGTTACAAAGACAATGTTTTTCACCCTTGGGAGATCGCTTTCACTCTCTTTAATGGATTGAATCAGAGGCCGAAAAACAAGGTTCCTGCAATTGGAACCGCATTATTGAATATTGCTGAATTTGCATCTTCAACTGATCAAAATGATTTTGATTTAAACATTCCACTCACACTAACTGGAGGTTCTGGGGAGCTTTCTCCTTTACTCTGTATATCAATAAGCTTGACGGAGGTAAGCGTAGCTCAAGAAAGCGTGGAGCCAATTCAGAGATCTATAGTGCCTGGGCCATCGCCCTCCGCCAAGTCGGGAGAAACAGCCTTGGTAGAAAAAGATGAGCTTTCTGCTATTAAAGCTGGTATTAGGAAAGTAATGATTTTGACGGAGTTTGTATCTTCCAAGAAATCAAAAAAGGGATGTCGTGAGGAAGAAGGAAGTGAAGGTAGGTGCTCTAGAAGTGAGGATGGTGAATACAATTATCCTTTGGATTCTGAGTCAATTGATGATTCTGAGGAAGGTGAAACAGATGAGGGGAAGGAGGATTCCAGCATTAGGAAGTCATTCAGTTATGGAACACTGGCCTCTGCAAATGCTGGGGGATTTTTTCATTCCAATATGAGAGTAAATTGTAATGATGAAGACTGGGTTTATTACAGCCATCGAAAGTCTGATGTTGGGTGTTCACGGATGGAGGATTCTACAACTTCTTCTTCTGATCCATATTTACAAAGTTCTAAGCGCAGCATACTTCCATGGAGGAAGAGGAAGTTGAGTTTCAGATCTCCTAAAGCTTATAAGGGAGAGCCGTTGCTAAAGAAGTCATATGCAGAAGAAGGTGGTGATGACATAGATTTTGATCGCCGTCAACTTAGCTCCGATGAATCCCTTTCTTTGACTTGGTACAAGACTGAGGATGACTTGTCTGCACATCGATCGTCAATCTCTGAATTTGGGGATGGCAGTTTTGCTGTAGGGAGTTGGGAGCAGAAAGAAGTCATGAGTCGTGATGGTCATATGAAGCTTCAAACACAGGTCTTCTTTGCTTCAATTGATCAACGCAGTGAACGTGCAGCAGGTGAGAGTGCATGTACAGCTCTTGTTGCTGTGATTGCTGACTGGTTTCAAAATAATCGTGATCTTATGCCCATAAAGTCGCAGTTTGATAGTCTAATTAGAGAAGGCTCCTCAGAATGGAGGAACCTATGTGAAAATGATGCCTATAGAGAGCGGTTCCCTGACAAGCATTTTGACCTGGAAACAGTCATTCAAGCAAAAATACGTCCGCTTACTGTGGCTCCTGGGAAGTCCTTCATTGGTTTTTTTCATCCTGAAGGGATGGATGAAGGCAGATTTGACTTTCTGTATGGTGCCATGTCTTTTGATAATATTTGGGATGAGATTAGTCGTGCTGGACAAGAGTGCCCTAGCAATGGTGAACCTCACATTTATGTTGTTAGTTGGAAGATCATTTTTTCATCCTCAAAGTTGAATATGATTGTTATTACATCATTGACACTTTGGGAGAGAGACTTTATGAAGGGTGCAACCAGGCATATATCTTGA

>Glyma03g36191.2   sequence type=CDS   gene model=Glyma03g36191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGGTGAAGATGATGAGGTGGCGGCCATGGCCGCCTCTCCTCTCGAAGAAGTTCCAAGTGAGGCTGCTCGTGCGGAGGCTCCAGGGCTGCGATCTGCTGCGGAACGCTGCACGTGAAGGTTCCAAATTGGTTCTTGAGATTCGCTGGAAGGGTCCTAAGTTGACCCTTGGCTCTCTGCGACGGAGCTCCGTCGCGAGAAACTTTACTAAAGAGGCGGAATTTGACGTCGACGGCGGTGGCGCCGCCGTGGTTCACTGGGACGAGGAGTTTCCGACGTTGTGCAATTTGAACGGTTACAAAGACAATGTTTTTCACCCTTGGGAGATCGCTTTCACTCTCTTTAATGGATTGAATCAGAGGCCGAAAAACAAGGTTCCTGCAATTGGAACCGCATTATTGAATATTGCTGAATTTGCATCTTCAACTGATCAAAATGATTTTGATTTAAACATTCCACTCACACTAACTGGAGGTTCTGGGGAGCTTTCTCCTTTACTCTGTATATCAATAAGCTTGACGGAGGTAAGCGTAGCTCAAGAAAGCGTGGAGCCAATTCAGAGATCTATAGTGCCTGGGCCATCGCCCTCCGCCAAGTCGGGAGAAACAGCCTTGGTAGAAAAAGATGAGCTTTCTGCTATTAAAGCTGGTATTAGGAAAGTAATGATTTTGACGGAGTTTGTATCTTCCAAGAAATCAAAAAAGGGATGTCGTGAGGAAGAAGGAAGTGAAGGTAGGTGCTCTAGAAGTGAGGATGGTGAATACAATTATCCTTTGGATTCTGAGTCAATTGATGATTCTGAGGAAGGTGAAACAGATGAGGGGAAGGAGGATTCCAGCATTAGGAAGTCATTCAGTTATGGAACACTGGCCTCTGCAAATGCTGGGGGATTTTTTCATTCCAATATGAGAGTAAATTGTAATGATGAAGACTGGGTTTATTACAGCCATCGAAAGTCTGATGTTGGGTGTTCACGGATGGAGGATTCTACAACTTCTTCTTCTGATCCATATTTACAAAGTTCTAAGCGCAGCATACTTCCATGGAGGAAGAGGAAGTTGAGTTTCAGATCTCCTAAAGCTTATAAGGGAGAGCCGTTGCTAAAGAAGTCATATGCAGAAGAAGGTGGTGATGACATAGATTTTGATCGCCGTCAACTTAGCTCCGATGAATCCCTTTCTTTGACTTGGTACAAGACTGAGGATGACTTGTCTGCACATCGATCGTCAATCTCTGAATTTGGGGATGGCAGTTTTGCTGTAGGGAGTTGGGAGCAGAAAGAAGTCATGAGTCGTGATGGTCATATGAAGCTTCAAACACAGGTCTTCTTTGCTTCAATTGATCAACGCAGTGAACGTGCAGCAGGTGAGAGTGCATGTACAGCTCTTGTTGCTGTGATTGCTGACTGGTTTCAAAATAATCGTGATCTTATGCCCATAAAGTCGCAGTTTGATAGTCTAATTAGAGAAGGCTCCTCAGAATGGAGGAACCTATGTGAAAATGATGCCTATAGAGAGCGGTTCCCTGACAAGCATTTTGACCTGGAAACAGTCATTCAAGCAAAAATACGTCCGCTTACTGTGGCTCCTGGGAAGTCCTTCATTGGTTTTTTTCATCCTGAAGGGATGGATGAAGGCAGATTTGACTTTCTGTATGGTGCCATGTCTTTTGATAATATTTGGGATGAGATTAGTCGTGCTGGACAAGAGTGCCCTAGCAATGGTGAACCTCACATTTATGTTGTTAGTTGGAAGATCATTTTTTCATCCTCAAAGTTGAATATGATTGTTATTACATCATTGACACTTTGGGAGAGAGACTTTATGAAGGGTGCAACCAGGCATATATCTTGA

>Glyma03g36191.1   sequence type=predicted peptide   gene model=Glyma03g36191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVVKMMRWRPWPPLLSKKFQVRLLVRRLQGCDLLRNAAREGSKLVLEIRWKGPKLTLGSLRRSSVARNFTKEAEFDVDGGGAAVVHWDEEFPTLCNLNGYKDNVFHPWEIAFTLFNGLNQRPKNKVPAIGTALLNIAEFASSTDQNDFDLNIPLTLTGGSGELSPLLCISISLTEVSVAQESVEPIQRSIVPGPSPSAKSGETALVEKDELSAIKAGIRKVMILTEFVSSKKSKKGCREEEGSEGRCSRSEDGEYNYPLDSESIDDSEEGETDEGKEDSSIRKSFSYGTLASANAGGFFHSNMRVNCNDEDWVYYSHRKSDVGCSRMEDSTTSSSDPYLQSSKRSILPWRKRKLSFRSPKAYKGEPLLKKSYAEEGGDDIDFDRRQLSSDESLSLTWYKTEDDLSAHRSSISEFGDGSFAVGSWEQKEVMSRDGHMKLQTQVFFASIDQRSERAAGESACTALVAVIADWFQNNRDLMPIKSQFDSLIREGSSEWRNLCENDAYRERFPDKHFDLETVIQAKIRPLTVAPGKSFIGFFHPEGMDEGRFDFLYGAMSFDNIWDEISRAGQECPSNGEPHIYVVSWKIIFSSSKLNMIVITSLTLWERDFMKGATRHIS*

>Glyma03g36191.2   sequence type=predicted peptide   gene model=Glyma03g36191   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVVKMMRWRPWPPLLSKKFQVRLLVRRLQGCDLLRNAAREGSKLVLEIRWKGPKLTLGSLRRSSVARNFTKEAEFDVDGGGAAVVHWDEEFPTLCNLNGYKDNVFHPWEIAFTLFNGLNQRPKNKVPAIGTALLNIAEFASSTDQNDFDLNIPLTLTGGSGELSPLLCISISLTEVSVAQESVEPIQRSIVPGPSPSAKSGETALVEKDELSAIKAGIRKVMILTEFVSSKKSKKGCREEEGSEGRCSRSEDGEYNYPLDSESIDDSEEGETDEGKEDSSIRKSFSYGTLASANAGGFFHSNMRVNCNDEDWVYYSHRKSDVGCSRMEDSTTSSSDPYLQSSKRSILPWRKRKLSFRSPKAYKGEPLLKKSYAEEGGDDIDFDRRQLSSDESLSLTWYKTEDDLSAHRSSISEFGDGSFAVGSWEQKEVMSRDGHMKLQTQVFFASIDQRSERAAGESACTALVAVIADWFQNNRDLMPIKSQFDSLIREGSSEWRNLCENDAYRERFPDKHFDLETVIQAKIRPLTVAPGKSFIGFFHPEGMDEGRFDFLYGAMSFDNIWDEISRAGQECPSNGEPHIYVVSWKIIFSSSKLNMIVITSLTLWERDFMKGATRHIS*







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