Glyma03g36060 - SoyBase

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Report for Sequence Feature Glyma03g36060

Feature Type:	gene_model
Chromosome:	Gm03
Start:	43057992
stop:	43060332
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma03g36060

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G11680	AT	Annotation by Michelle Graham. TAIR10: Aluminium activated malate transporter family protein \| chr3:3686995-3689329 REVERSE LENGTH=488	SoyBase	E_val: 5.00E-179	ISS
GO:0010044	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to aluminum ion	SoyBase	N/A	ISS
PF11744	PFAM	Aluminium activated malate transporter	JGI		ISS
UniRef100_B2LUQ7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Aluminum-activated malate transporter n=1 Tax=Glycine max RepID=B2LUQ7_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_B2LUQ7	UniRef	Annotation by Michelle Graham. Best UniRef hit: Aluminum-activated malate transporter n=1 Tax=Glycine max RepID=B2LUQ7_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma03g36060

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g36060 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g202200	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma03g36060

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma03g36060

Limit To All Plant Sequences

>Glyma03g36060.1   sequence type=CDS   gene model=Glyma03g36060   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGATATAGAGTCAACAACCCAAGCAAACAAGGGTGGATTTTTATCTCATTTGGGGAACTGCCTCCAGGATTTGCCTTGGAACTTCAAGTCCAAGGTTATCAACATCACAAGGAGCATAACAAAGATTGGAAAAGATGACCCCAGACGAGTAATTCACTCATTAAAAGTGGCAGTTGCTCTCACATCGGTGTCATTGGTTTACTACTCGAGGCCTCTTTATGATGGCTTCGGAGTTGCCGGAATGTGGGCTGTTCTGACAGTGGTGGTAGTGTTTGAATTCAGTGTAGGTGCAACCCTCAGCAAAGGTTTAAATAGAGGATTTGCTACATTATTAGCTGGTGCTTTAGGGGTTGGAGGGCAACACTTAGCTACAGCTTTTGGAGGAAGAGCAGAACCTATTGTCCTTGGGATCCTTGTCTTCATTTTAGCAGCAGGAGCTACTTTTTTCAGATTTTTTCCAAAGATCAAGCAAAGATATGATTATGGGATTGTGGTATTTATATTGACATTTTGTTTGGTCGCTGTCTCGGGTTATAGAGTGGAAGAACTCTTCGAGCTTGCCCATCAGAGACTTTCAACAATTTTATTAGGAGCAGCAGCTTGCATGGTCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACTTTCACAAGTTGGTGGCTTCCAATATAGAAAAGTTAGCAAATTACCTACAAGGATTCGAAACCGAATATTTTCATTGCTCAGAGGATACAAAAAAGTGTGAGAAGTCAGTTCTTGAAGGATATAAAAGTGTTCTTAATTCTAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCAGGACATGGCCGTTTTCGTCTTCGCCATCCTTGGGAGCAGTACTTGAAGATTGGAGCACTTACTCGGGAATGTGCTTACAAGATTGAAACCATTAACAACTACCTCAACCCGGAAATCCAAGTATCTTTGGAATTCAAGTGTAAAGTTCAGGAACCATGCACAAAGATGACCTCAGAGTCCAACAAGGCATTAAAGGCAATATCTTCATCAATCAAAAAAATGACACACCCATCAACTGCCAAAGTCCACATAGAAAATTCAAAAACTGCAGTTGAAGACCTCAAAGTTGCCCTTGAAATCGTTTCTTTGGAAGATACTGATCTCCTATCCATAATCCCAGTTGCCACAGTTGCATCAATACTCGAAGAAATCACCAAATCAGTGGAGAAAATATATGAGTCTGTTTCTGAGCTTTCTCACTTAGCCCATTTCAAGAGTGTTGTTGAACCCAATGTCTCACCAGAGAAGCCACCCCTTCTTCATCGAGGTATCATAAAACCTGTTGTGGATATTGATAACACCGTCGACCATGTTGAAATTACAATCCCAGAGATAACTACAGACTCTCCAGAGAAAGAAAAGGCACCAACAACAAAACCCTCGGAACATTTAATTTGTAAATAG

Predicted protein sequences of Glyma03g36060

Limit To All Plant Sequences

>Glyma03g36060.1   sequence type=predicted peptide   gene model=Glyma03g36060   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MDIESTTQANKGGFLSHLGNCLQDLPWNFKSKVINITRSITKIGKDDPRRVIHSLKVAVALTSVSLVYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLSKGLNRGFATLLAGALGVGGQHLATAFGGRAEPIVLGILVFILAAGATFFRFFPKIKQRYDYGIVVFILTFCLVAVSGYRVEELFELAHQRLSTILLGAAACMVISIFICPVWAGEDFHKLVASNIEKLANYLQGFETEYFHCSEDTKKCEKSVLEGYKSVLNSKASEESLANLARWEPGHGRFRLRHPWEQYLKIGALTRECAYKIETINNYLNPEIQVSLEFKCKVQEPCTKMTSESNKALKAISSSIKKMTHPSTAKVHIENSKTAVEDLKVALEIVSLEDTDLLSIIPVATVASILEEITKSVEKIYESVSELSHLAHFKSVVEPNVSPEKPPLLHRGIIKPVVDIDNTVDHVEITIPEITTDSPEKEKAPTTKPSEHLICK*

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