Report for Sequence Feature Glyma03g35810
Feature Type: gene_model
Chromosome: Gm03
Start: 42910926
stop: 42912325
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g35810
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G04820 AT
Annotation by Michelle Graham. TAIR10: ovate family protein 13 | chr5:1399685-1400467 FORWARD LENGTH=260
SoyBase E_val: 3.00E-41 ISS
GO:0045892 GO-bp
Annotation by Michelle Graham. GO Biological Process: negative regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
PF04844 PFAM
Protein of unknown function, DUF623
JGI ISS
UniRef100_D7LY61 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ATOFP13/OFP13 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LY61_ARALL
SoyBase E_val: 7.00E-39 ISS
UniRef100_I1JQ67 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JQ67_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma03g35810
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma03g35810
Paralog Evidence Comments
Glyma19g38471 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma03g35810 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.03g200100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma03g35810
Coding sequences of Glyma03g35810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g35810.1 sequence type=CDS gene model=Glyma03g35810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGCAAGAAAATGAAGCTCCCTTCCCTACTACACAACAAACCCTCTTCTTCTTCTTGGCCCTGCCACCAACCGCGAACCCTCTCTTTCCGAACCCAAAACGACGCCGCATTCAAAACCATCAACGCCGCTTACTTGGACACGCTGGAGAGCTCCGAAACTTCCTTCTTCACAGTCTCCCCTGACTCCGGAAGCTTCTCAACTGCCTCAGAACAAGATTCTAGAAGACCCCACTCACTAGACTCCGTCATTCGCGGCTTGCGTTCCGACCGCTTATTCTTCGAGCCAGACGAGACAAGCTCCATATTAGAGGCCAAACCACCACCACCACCACCACCACCACCATCACCACCACCACCACCAACAACAACAACAACGTTGCCGTTCAAAGACAGCGTTGTCATGTCCGTGGACTCTCAGGACCCTTACGTCGATTTCCGCAGGTCCATGGAGGAGATGGTGGAGGCGCAGTGCGTCAAGGACTGGGAGGGTCTCCAAGAGCTTCTGTGTTGGTATTTGAAAGTCAATGGAAAAACCAACCATGGCTATATTGTTGGCGCTTTCGTCGATTTATTGGTCGCTTCTTCTTCTTCTTCTTCCTCTTCCTCTTTCTCGGTTTCTTCTTCTTCTAATAATAATAACAACTCCCAAATAGTATCTCCTTCTTCCCCTTTATCTTTTTATAGCTCTTCTCTCTCTTCCTCTTGCAGCACTCGCTGTGTTTCTTGTTTGGAAGCTGAGGTCGTCGAGGTTCATAATGATATAGCCACTAGTACTCCTACTTCTTCTTTCTTGTTACAACAAGTTAGGGAAGACCAGCCATCATCTTCTTCTTCTTCCTATTTGAATTAA
Predicted protein sequences of Glyma03g35810
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g35810.1 sequence type=predicted peptide gene model=Glyma03g35810 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGKKMKLPSLLHNKPSSSSWPCHQPRTLSFRTQNDAAFKTINAAYLDTLESSETSFFTVSPDSGSFSTASEQDSRRPHSLDSVIRGLRSDRLFFEPDETSSILEAKPPPPPPPPPSPPPPPTTTTTLPFKDSVVMSVDSQDPYVDFRRSMEEMVEAQCVKDWEGLQELLCWYLKVNGKTNHGYIVGAFVDLLVASSSSSSSSSFSVSSSSNNNNNSQIVSPSSPLSFYSSSLSSSCSTRCVSCLEAEVVEVHNDIATSTPTSSFLLQQVREDQPSSSSSSYLN*