|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G27060 | AT | Annotation by Michelle Graham. TAIR10: Ferritin/ribonucleotide reductase-like family protein | chr3:9979971-9981057 REVERSE LENGTH=332 | SoyBase | E_val: 0 | ISS |
GO:0006260 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA replication | SoyBase | N/A | ISS |
GO:0006261 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA-dependent DNA replication | SoyBase | N/A | ISS |
GO:0006281 | GO-bp | Annotation by Michelle Graham. GO Biological Process: DNA repair | SoyBase | N/A | ISS |
GO:0007275 | GO-bp | Annotation by Michelle Graham. GO Biological Process: multicellular organismal development | SoyBase | N/A | ISS |
GO:0009165 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nucleotide biosynthetic process | SoyBase | N/A | ISS |
GO:0009186 | GO-bp | Annotation by Michelle Graham. GO Biological Process: deoxyribonucleoside diphosphate metabolic process | SoyBase | N/A | ISS |
GO:0012501 | GO-bp | Annotation by Michelle Graham. GO Biological Process: programmed cell death | SoyBase | N/A | ISS |
GO:0051726 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell cycle | SoyBase | N/A | ISS |
GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0004748 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | SoyBase | N/A | ISS |
GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
GO:0046914 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transition metal ion binding | SoyBase | N/A | ISS |
KOG1567 | KOG | Ribonucleotide reductase, beta subunit | JGI | ISS | |
PTHR23409 | Panther | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN | JGI | ISS | |
PTHR23409:SF6 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
PF00268 | PFAM | Ribonucleotide reductase, small chain | JGI | ISS | |
UniRef100_B9RBH6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Ribonucleoside-diphosphate reductase small chain, putative n=1 Tax=Ricinus communis RepID=B9RBH6_RICCO | SoyBase | E_val: 0 | ISS |
UniRef100_I1JQ20 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JQ20_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma03g35330 not represented in the dataset |
Glyma03g35330 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.03g195600 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma03g35330.1 sequence type=CDS gene model=Glyma03g35330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCCGTCGATACCAGAAGAACGACTCCTGACTCCGAACCCAGACCGGTTCTGCATGTTCCCAATCCAATACCCTCAAATCTGGGAAATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGCCACCCTCAGCGACGGCGAGCGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGCTTCACCAAAGAAATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATCGAAAATATCCACTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATCAAAGACTCCACAGAAAAAAATCGTCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAGTGGGCCCTCCGCTGGATCGATGCCTCAGAATCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGCGTCGAGGGAATATTCTTCTCCGGAAGCTTTTGCGCGATATTTTGGCTCAAGAAGCGTGGGTTAATGCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTTCACTGCGACTTCGCGTGTCTCTTGTACTCGCTTCTCAGGAAGAAGCTTAGTGAGGAGCGCGTGAGGGAGATTGTGCGTGACGCGGTGGAGATTGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGTGCGTTGGTGGGGATGAACGGGGAGTTGATGAGTCGGTATATTGAGTTTGTTGCGGATCGGTTGCTGGATGCGCTTGGGTGTGGGAAGGTGTACGGTGCTCAGAATCCCTTTGATTGGATGGAGCTTATTTCGCTTCAGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGGGAGTACCAGAAGGCTTCTGTTATGTCTAGCTTGAATGGTAATGGAGGGGCGCATGTCTTCAAGATGGATGAGGATTTTTAA
>Glyma03g35330.1 sequence type=predicted peptide gene model=Glyma03g35330 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MPSIPEERLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGERHFITHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFVCDALPCALVGMNGELMSRYIEFVADRLLDALGCGKVYGAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHVFKMDEDF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||