Report for Sequence Feature Glyma03g35030
Feature Type: gene_model
Chromosome: Gm03
Start: 42354556
stop: 42363837
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g35030
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G36380 AT
Annotation by Michelle Graham. TAIR10: pleiotropic drug resistance 6 | chr2:15257583-15263627 FORWARD LENGTH=1453
SoyBase E_val: 0 ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0000166 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleotide binding
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016887 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATPase activity
SoyBase N/A ISS
GO:0017111 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity
SoyBase N/A ISS
GO:0042626 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATPase activity, coupled to transmembrane movement of substances
SoyBase N/A ISS
KOG0065
KOG
Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily
JGI ISS
PTHR19241 Panther
ATP-BINDING CASSETTE TRANSPORTER
JGI ISS
PTHR19241:SF10 Panther
ATP-BINDING CASSETTE TRANSPORTER-RELATED
JGI ISS
PF00005 PFAM
ABC transporter
JGI ISS
PF01061 PFAM
ABC-2 type transporter
JGI ISS
PF08370 PFAM
Plant PDR ABC transporter associated
JGI ISS
UniRef100_G7L5Z3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ABC transporter G family member n=1 Tax=Medicago truncatula RepID=G7L5Z3_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233718E UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233718E related cluster n=1 Tax=unknown RepID=UPI000233718E
SoyBase E_val: 0 ISS
Expression Patterns of Glyma03g35030
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma03g35030
Paralog Evidence Comments
Glyma19g37760 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma03g35030 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma03g35030
Coding sequences of Glyma03g35030
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g35030.2 sequence type=CDS gene model=Glyma03g35030 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCATCCACATCAGTGAGAAATGATTTGGTCAGCGGAAAAAGAAACCAGCGGAGCTGGCCCTCATCGAGTTTCAGAGCAGCAAGTTGGAGTGCATCTCCATTCACAAAGAGTGCTGGACGCAGCAGTGGAGAGGATAATGAGGAGGATCTCAAATGGGCTGCCATCGAGCGTTTGCCAACGCTAGATCGCATGAGAAAAGGGATGATGAGTGTAGTGCTTGACAACGGAAAGGTTGTGTGTTGCCAAGTTGATGTCACTCATCTTAAGTTGCAAGACAAGAAGCAACTATTGGATACTGTACTCAAATATGTTGACGATGATAATGATAAGTTTCTTCGTAAACTTAGAGACAGAACTAATAGGGTGGGGATTAAAATTCCAAATATTGAAGTCAGATACGAGAATTTATCGGTGGAGGGAAATGTGCATGTTGGAACTAGAGCACTTCCTACCCTGCTTAATGTTACTCTCAACACCTTTGAGAGGATTCTGGAGTTGTTTCGCCTTGCACCTTCCAAGAAGAGGAAAATTCATATTCTTAAAGATGTTAGTGGAATCGTCAAACCATCAAGGATGACCCTACTTCTAGGTCCTCCAGGTGCAGGGAAAACAACATTACTTTTAGCACTTGCAGGGAAGCTTGACCCAGATTTAAAGGTTTCAGGGAGAATAACTTATTGTGGCCATGAACTGAAAGAATTTGTTGCTAAAAAAACTTGTGCCTATATTGGTCAACATGACCTTCACTATGGAGAAATGACAGTGAGAGAGACATTAGATTTTTCAGGACGTTGTCTAGGTGTTGGCACAAGGTATCAAATGTTGGAAGAACTTTTACGAAGGGAGAAACAAGCAGGAATTAAACCGGATCCTGAGATTGATGCATTTATGAAGGCTACAGCCATATATGGTCAAAAAACTAATTTGCAAACAGATTATGTTCTTAAGATAATTGGATTGGATATTTGCGCTGACACTTTGGTTGGTGATAACATGAGAAGGGGTATCTCCGGTGGACAAAGGAAGCGTGTCACAACAGGGGAGATGCTAGTAGGTCCGGCAAAGGCACTATTTATGGACGAAATATCAACAGGATTGGACAGTTCCACCACTTTTCAGATATGCAAGTTCATGAGGCAAATGGTTCATATAATGGATGAAACCATGGTGATTTCTCTTCTACAACCAGCACCGGAGACATATGAACTATTTGATGATGTTATCCTTCTTTCAGAAGGTCAAATTGTATACCAAGGTCAACGAGAACATGTGCTAGAGTTCTTTGAAAACATGGGTTTCAAATGTCCTCCAAGAAAGGGAGTTGCTGACTTTTTACAAGAAGTAACATCTAAGAAAGATCAAGAACAATATTGGTTTAGAAGAGATGAACCTTATAGATACATTTCAGTTCCTGAATTTGCAGAGTGCTTCCAATCGTTTTACATAGGAGAACAACTTGCAACAGAGTTTAAGGTTCCTTATGATAAGAGTCAAACTCATCGTGCTGCCTTAGCTAAAGACAAGTACGGTATATCAAATTGGGAACTACTGAAGGCATGTTTCTCAAGAGAATGGTTGCTTATGAGACGCGAAATGTTTGTCTACATATACAGGATAATACAGTTAGTTGTCTTATCTATTTTAGGCTTTACTTTGTTCCTTAGAACTGAAATGTCAGTGGGCACTGTTGAAGATGGGATGAAGTTCTTTGGAGCAATGTTTTTCTCTATAATGAACATAATGTTCAATGGGTTTTCAGAACAAGCCATGCTTGTTTCAAGGCTTCCTGTCTTTTACAAACAAAGGGATTTCATGTTCTACCCTGCATGGGCATTTGGGTTACCTATATGGGTTCTCAGGATCCCCATTTCCTTGGTGGAATCAGGAATATGGGTTGTTTTCACATACTACACAATTGGATTTGCTCCTTCAGCTAGCAGGTTTTTCAAACAATTCTTGGCACTGTTTGGCGTTCATCAGATGGCTATCTCTCTATTTCGGCTCGTTGGTGCAGTTGGTAGAACATATGTTGTTGCTAATATCCTGAGTGGCTTGACTTTTCAAATAGTATTGGTGCTTGGAGGATTTATTGTCTCCAAAAATAATATCAAGCCATGGTTGAAATGGGGCTATTATGTTTCTCCTATGATGTATGGTCAGAATGCCATAGTAATAAATGAATTTTTAGACGAAAGATGGAGTAAACCAAATACAGACTCTAGATTTGATGCACCTACAGTTGGAAAAGTACTTCTGAAGTCTAGAGGCTTTTTCACTGATGATTATTGGTTTTGGATATGTATTGGAGCCTTGTTTGGTTTTGTTCTTCTTTTCAATCTTCTGTGCATTGTTGCATTGACTTATTTGAATGGAGGTCAAGGTATAAACATGGCAGTGAGAAATGCTTCACATCAAGAACGAAGAACAGGAATGGTCCTGCCGTTTCAACCTCTTTCACTCGCATTCAATGACGTGAACTACTATGTAGACATGCCTGCTGAAATGAAAAGTCAAGGAATCAATGAAGATAGACTTCAACTACTACATGATGCTAGTGGTGCTTTTAGACCAGGTATTTTGACAGCACTTATGGGTGTTAGTGGTGCTGGGAAGACTACCCTTATGGATGTATTAGCTGGAAGAAAAACAGGTGGATACATTGAAGGAAGTATTAGCATCTCAGGTTATCCAAAGAACCAAGCAACATTTGCTCGTGTCAGCGGTTATTGTGAACAAAATGACATTCATTCTCCATATGTTACTGTGTATGAGTCACTATTGTTTTCAGCATGGCTTCGCCTTCCTTCAGATGTAAAAGCACAAAATCGAAAGATGTTTGTTGAAGAAGTTATGGAGTTGGTTGAGCTTAACCAAATCAGAAATGCACTTGTGGGCCTTCCAGGAGTGGATGGTCTATCCACGGAACAGAGGAAAAGGGTTACTATTGCTGTAGAATTGGTTGCCAACCCTTCAATTATCTTCATGGATGAACCAACATCTGGCCTTGATGCTAGAGCTGCTGCTATTGTTATGCGTACTGTAAGAAACACAGTGGACACTGGGAGAACCGTTGTTTGCACAATTCATCAACCAAGCATAGACATTTTTGAAGCTTTTGATGAGTTACTTTTGATGAAAAGAGGAGGACAAGTTATCTATGCTGGACCTCTTGGTCACCATTCACAAAAGCTCATAGAATATTTTGAATCCATTGCAGGGGTTCAAAAAATCAAGGATGGTTATAATCCTGCCACATGGATGCTCGAGGTTAGCACTCCTTCAATTGAGGCTCATCTTGGCATAGATTTTGCGGAGATTTACACTAACTCTACTCTTTACCAAAGGAATCAAGAGCTTATCAAAGAGCTCAGTACTCCACCACAGGGTTCCAGTGACTTGCGCTTCCCAACCAAATATTCCCAATCATTCTTTGTTCAGTGCAAAGCTTGCTTCTGGAAACAATATTGGTCGTATTGGAGAAACCCTTCGTACAATGCAGTTCGATTGTTCTTCACAATAGCCATTGGGATAATGTTTGGTCTAATCTTCTGGAATAAAGCCAAAAATATCAAAAAGCAACAAGATTTGTTTGATCTTTTAGGAGCCATGTACGCTGCAGTGATGTTCCTTGGAACCTCGAACACTATGGGAGTGCAACCAATTGTTGACATAGAAAGAACTGTATTGTATCGTGAAAGAGCTGCAGGGATGTATTCAACATTGACTTATGCAATTAGTCAGGTGGCAATAGAGGCAATTTATTCTGCCACTCAAACGACCATCTTCAGTGTCATCATCTACTCCATGATGGGGTTTGAATGGACGGCCAGGAAATTTCTTTCCTTCTACTACTTCATGCTTATGTGTTTGATCTACTACACATTATATGGGATGATGATTGTTGCCGTCACCCCAAGTTTTCAAATTGCTGCTGTTTGCAATTCCTTCTTCTTGACCATCTGGAACACGTTCTGTGGCTTTGTCATTCCTAGGACGCAAATTCCTATATGGTGGAGATGGTACTATTGGCTAGCTCCTAATGCTTGGACACTGTATGGCCTTGTTACCTCTCAATTCGGTGATAAAATTACACAAGTGGAAATTCCAGGAGCTGAAAACATGGGGCTGAAGGAACTACTTAAGAAAAACTTCGGTTATGACTATCACTTCCTCCCAGTGGTTGTTGTTGTTCACTTAGGCTGGGTTCTCCTTTTCTTGTTTGTTTTTGCCTATAGCATAAAATTCCTGAACTTCCAAAAGAGATGA
Predicted protein sequences of Glyma03g35030
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g35030.2 sequence type=predicted peptide gene model=Glyma03g35030 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASTSVRNDLVSGKRNQRSWPSSSFRAASWSASPFTKSAGRSSGEDNEEDLKWAAIERLPTLDRMRKGMMSVVLDNGKVVCCQVDVTHLKLQDKKQLLDTVLKYVDDDNDKFLRKLRDRTNRVGIKIPNIEVRYENLSVEGNVHVGTRALPTLLNVTLNTFERILELFRLAPSKKRKIHILKDVSGIVKPSRMTLLLGPPGAGKTTLLLALAGKLDPDLKVSGRITYCGHELKEFVAKKTCAYIGQHDLHYGEMTVRETLDFSGRCLGVGTRYQMLEELLRREKQAGIKPDPEIDAFMKATAIYGQKTNLQTDYVLKIIGLDICADTLVGDNMRRGISGGQRKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQICKFMRQMVHIMDETMVISLLQPAPETYELFDDVILLSEGQIVYQGQREHVLEFFENMGFKCPPRKGVADFLQEVTSKKDQEQYWFRRDEPYRYISVPEFAECFQSFYIGEQLATEFKVPYDKSQTHRAALAKDKYGISNWELLKACFSREWLLMRREMFVYIYRIIQLVVLSILGFTLFLRTEMSVGTVEDGMKFFGAMFFSIMNIMFNGFSEQAMLVSRLPVFYKQRDFMFYPAWAFGLPIWVLRIPISLVESGIWVVFTYYTIGFAPSASRFFKQFLALFGVHQMAISLFRLVGAVGRTYVVANILSGLTFQIVLVLGGFIVSKNNIKPWLKWGYYVSPMMYGQNAIVINEFLDERWSKPNTDSRFDAPTVGKVLLKSRGFFTDDYWFWICIGALFGFVLLFNLLCIVALTYLNGGQGINMAVRNASHQERRTGMVLPFQPLSLAFNDVNYYVDMPAEMKSQGINEDRLQLLHDASGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARVSGYCEQNDIHSPYVTVYESLLFSAWLRLPSDVKAQNRKMFVEEVMELVELNQIRNALVGLPGVDGLSTEQRKRVTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGHHSQKLIEYFESIAGVQKIKDGYNPATWMLEVSTPSIEAHLGIDFAEIYTNSTLYQRNQELIKELSTPPQGSSDLRFPTKYSQSFFVQCKACFWKQYWSYWRNPSYNAVRLFFTIAIGIMFGLIFWNKAKNIKKQQDLFDLLGAMYAAVMFLGTSNTMGVQPIVDIERTVLYRERAAGMYSTLTYAISQVAIEAIYSATQTTIFSVIIYSMMGFEWTARKFLSFYYFMLMCLIYYTLYGMMIVAVTPSFQIAAVCNSFFLTIWNTFCGFVIPRTQIPIWWRWYYWLAPNAWTLYGLVTSQFGDKITQVEIPGAENMGLKELLKKNFGYDYHFLPVVVVVHLGWVLLFLFVFAYSIKFLNFQKR*