Glyma03g34720 - SoyBase

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Report for Sequence Feature Glyma03g34720

Feature Type:	gene_model
Chromosome:	Gm03
Start:	42049861
stop:	42054001
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma03g34720

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G53000	AT	Annotation by Michelle Graham. TAIR10: phloem protein 2-A15 \| chr3:19654278-19655801 FORWARD LENGTH=300	SoyBase	E_val: 3.00E-165	ISS
GO:0006499	GO-bp	Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0030246	GO-mf	Annotation by Michelle Graham. GO Molecular Function: carbohydrate binding	SoyBase	N/A	ISS
UniRef100_B9SRL8	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: ATPP2-A13, putative n=1 Tax=Ricinus communis RepID=B9SRL8_RICCO	SoyBase	E_val: 0	ISS
UniRef100_I1JPV3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JPV3_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma03g34720

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g34720 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g189500	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma03g34720

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma03g34720

Limit To All Plant Sequences

>Glyma03g34720.1   sequence type=CDS   gene model=Glyma03g34720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGGGCCTCGCTGTCGAACCTGGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGCGACATCCCGGAGAATTGCGTCGCTCGCGTCTTTCTCCACCTCACTCCTCCGGAGATTTGCAACCTCGCGCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCCGCGGATTCCGTGTGGCAGACGAAGCTGCCTCGCAACTACCAAGATCTGCTCGATTTAATGCCTCCCGAGAGGCACCGGAATCTCTCCAAGAAGGACATCTTCGCGCTGCTCTCTCGCGCAGTGCCCTTTGATGACGGCAACAAGGAAGTGTGGCTGGATAGGGTTACCGGAAGAGTTTGCATGTCAATTTCGGCGAAGGCGATGTCTATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAAATATGGTGGTTTGAGGTGGATGGGGAGTTCAGCTTCCCTTTTCCTGCTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGATTTTCCAAGAGGCTTGGTCGACGTGTCTGCAGTTATGAACATACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACCATGGATGGTCAGCAAGCATCATCTGAGTGCTACTTGGATGAAACTGAACCTGATGATTTACACGGCAATCACAAGCGTGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATCGTCAGTGGATCAGAACCTACAACTAAAGTAAGATTCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCGAGGGATTTGAGAGAGCGCAAGAGAAGTGGCATTCTGAAATAA

Predicted protein sequences of Glyma03g34720

Limit To All Plant Sequences

>Glyma03g34720.1   sequence type=predicted peptide   gene model=Glyma03g34720   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGASLSNLGSNGSAAAPGLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWQTKLPRNYQDLLDLMPPERHRNLSKKDIFALLSRAVPFDDGNKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEFSFPFPADIYTLSFRLHLGRFSKRLGRRVCSYEHTHGWDIKPVRFELSTMDGQQASSECYLDETEPDDLHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPRDLRERKRSGILK*

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