Report for Sequence Feature Glyma03g34630
Feature Type: gene_model
Chromosome: Gm03
Start: 41997083
stop: 41999380
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g34630
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G36650 AT
Annotation by Michelle Graham. TAIR10: unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:15359994-15361194 FORWARD LENGTH=373
SoyBase E_val: 3.00E-39 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_G7I9D9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein CHUP1 n=1 Tax=Medicago truncatula RepID=G7I9D9_MEDTR
SoyBase E_val: 1.00E-104 ISS
UniRef100_I1JPU5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JPU5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma03g34630
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma03g34630
Paralog Evidence Comments
Glyma19g37300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma03g34630 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.03g188800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma03g34630
Coding sequences of Glyma03g34630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g34630.1 sequence type=CDS gene model=Glyma03g34630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAAACACAACATCAAAGTCTGAGGTCCTAATAAAGCCAATTATCCTCAAAGCCGGTGTTCCTTTGGCTGTGTCTTTTGCTGGTTTCATCTATGCTTGGTTCGTGGCAAAGAAAAGCCTCTCTAAGACCTCTTCTTTGTCACCAAATGAAGCAAGTTCCTATGAAGAAAGTTGTCATAGTCATAGCCTCTCTTGTATGGAAGATGAAGGACATAGTACAACATTGGATGAAAGTGTTGTTGCTGAAAGTTCGATGATCAATGACACCCCATGTTTAGAAGAAGAGATTAATGGCCTAAGAAGCAGGATTGAAGGTATGCATATGAAGGAGTTGGCTTTACGTTTGCAGTTTGATCGTTATTGTGACTTGAAAGAGCAAGAAACTGTGGTTGGGGAGATCAAAAACATGTTGTCACTTGAGACTGCTCGTGTTGGCTTCTTGGATAGGGAGATTTCGTCGATGGAGACGCAGAATAAGAGGTTGGAGAGTTTTGTTGCTCAATATCTCAGAGTTGTGGAACAGATTGAGCGTTGGAAATCTGAGAATAGAACGCTTAGGAGGAAGTTTAAGAGGTTAATGGAGAAATCAAAGGCACAAACTCGCCTCGCGAAGGAGCAGGCTTTGAAGATCAAACTGGAAGAAGAAGAAATCTTGAGAAGCCGTGATGCCTTGGAAACAAAAATTGATGTCGTTGGTAAACTTGAGGATAGAATGGAAGAGCTGCAGAGAGCTTTGGATCAATTGCAGGATGAGAAGAATGAACTTCTGAAGAAGCTCGACACAGCAGAAAAATCCTATGCTTCCAAGATTGAAGATGGAGATGTAAGTAGGGAAGAGTGCAAACAGCTTCTAGATGAATTGGAGCAAGTCAAGAAAGAACGAGCAGATGAAGCTAAAGAACTCATTTACTTGCGGTGGACAAATGCTTGTTTAAGGCATGGTCTAGTGAGGCACCATGAACAACAACAGAATCAGGATAAAAACCATTTAGAATTGGAATTTGGAAGAAATGATGTAGTTATCAATTATGATTCGGAGCATGAACTGCACAATTCCCTTTTGGAGCATCACAGTGATCCTTCCTTTGATGAGCATGCTAGTGGTCATGATCACAGTGACATTGCTTGTTCAAAAAGGACAAAGTTGCTTGAAAGGCTAAAGAGATGGGTTGATGGCAGTGAAAAACCTAGAGTTGGGCATTCTATTTCCAAAGGGGCAGAGGAACATCTAGTTCCTAGAAGGAAGTCATGCTCTAGTGCTTGA
Predicted protein sequences of Glyma03g34630
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g34630.1 sequence type=predicted peptide gene model=Glyma03g34630 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MENTTSKSEVLIKPIILKAGVPLAVSFAGFIYAWFVAKKSLSKTSSLSPNEASSYEESCHSHSLSCMEDEGHSTTLDESVVAESSMINDTPCLEEEINGLRSRIEGMHMKELALRLQFDRYCDLKEQETVVGEIKNMLSLETARVGFLDREISSMETQNKRLESFVAQYLRVVEQIERWKSENRTLRRKFKRLMEKSKAQTRLAKEQALKIKLEEEEILRSRDALETKIDVVGKLEDRMEELQRALDQLQDEKNELLKKLDTAEKSYASKIEDGDVSREECKQLLDELEQVKKERADEAKELIYLRWTNACLRHGLVRHHEQQQNQDKNHLELEFGRNDVVINYDSEHELHNSLLEHHSDPSFDEHASGHDHSDIACSKRTKLLERLKRWVDGSEKPRVGHSISKGAEEHLVPRRKSCSSA*