Report for Sequence Feature Glyma03g34230
Feature Type: gene_model
Chromosome: Gm03
Start: 41716627
stop: 41718387
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g34230
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G39210 AT
Annotation by Michelle Graham. TAIR10: Major facilitator superfamily protein | chr2:16366287-16368231 REVERSE LENGTH=601
SoyBase E_val: 0 ISS
GO:0006865 GO-bp
Annotation by Michelle Graham. GO Biological Process: amino acid transport
SoyBase N/A ISS
GO:0006888 GO-bp
Annotation by Michelle Graham. GO Biological Process: ER to Golgi vesicle-mediated transport
SoyBase N/A ISS
GO:0009627 GO-bp
Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance
SoyBase N/A ISS
GO:0034976 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress
SoyBase N/A ISS
GO:0043090 GO-bp
Annotation by Michelle Graham. GO Biological Process: amino acid import
SoyBase N/A ISS
GO:0050832 GO-bp
Annotation by Michelle Graham. GO Biological Process: defense response to fungus
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0009506 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PTHR21576 Panther
UNCHARACTERIZED NODULIN-LIKE PROTEIN
JGI ISS
PTHR21576:SF8 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF06813 PFAM
Nodulin-like
JGI ISS
UniRef100_G7ZZA4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Nitrate and chloride transporter n=1 Tax=Medicago truncatula RepID=G7ZZA4_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233948F UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233948F related cluster n=1 Tax=unknown RepID=UPI000233948F
SoyBase E_val: 0 ISS
Expression Patterns of Glyma03g34230
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma03g34230
Paralog Evidence Comments
Glyma19g36940 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma03g34230 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.03g185100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma03g34230
Coding sequences of Glyma03g34230
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g34230.1 sequence type=CDS gene model=Glyma03g34230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGGTGGCAGACTTCACTAGTGGTGGTTTGAGGGGAATGAAGGCCCTCAGCTATCATGTTCTCACGGGGCGTTGGTTCATGCTATTTGCATCTTTACTCATCATGTCCGTTGCAGGAGCAACCTACATGTTTGGAATATACTCTAACGAGGTCAAAACCTCATTAGGGTACGACCAATCCACTCTCAACTTGCTAAGCTTCTTCAAAGACCTAGGTGCCAACGTTGGAGTCATATCCGGGTTGGTCAACGAGGTAACACCACCTTTCGTGGTGCTCTCAATTGGGGTCATCATGAACTTCTTTGGCTACTTCATGATATTTCTTGCTGTCTCTGGCCGCATTGACAAACCCCAAGTTTGGCAAATGTGTCTCTACATTTGCATTGGTGCAAATTCTCAAACTTTTGCCAATACTGGTGCTTTAGTCACGTGTGTGAAAAACTTCCCTGGAAGCCGTGGCAGTATCTTAGGCATACTCAAAGGCTACGTTGGTCTAAGTGGTGCCATCATCACACAACTCTACCATGCTTTCTATGGTGATCATGACTCTCAAGCTCTTATTTTACTCATTGCGTGGCTCCCTGCTGCTGTTTCCTTCCTTTTTCTTCCAACAATTCGGTTAATGAACACAGTGCACCACCAACCCAAGGAGGACAACAGAGTTTTCTACCACCTTCTATATATTTCACTTGGCCTTGCTGCTTTTCTCATGGTTCTGATCGTTGTACAAAACAAGCTTAGTTTTTCAAGGATTGAATACATAGTAGATGGCCTTGTGGTTTTCTCCTTTCTTCTTCTACCACTTGCTGTGGTGTTTAGAGAGGAGATAAACCAATTGAAAGCCAAAACGCAAGGTTTAACTGATTCACCACCTCAGTTGAAAGTAGTCACTGAAGCTATTCCATCTTCAAACGTGGTGGAGCAAGAAGTAGTACCAGCAGCTACTACAAGTTCCCACGAGAAAAGTTCTTGTTTAAGGAACATATTCAACCCTCCAAAGAGGGGAGAAGACTACACCATTTTGCAAGCTTTATTTAGTATTGATATGCTGATTTTGTTCATTGCAACAACCTTTGGTGCTGGAGGAACATTAACAGCCATAGACAACCTGGGACAGATTGGACACTCATTAGGATACCCGAACAAAAGCACTACAACATTTGTTTCCTTAGTGAGCATATGGAACTACTTGGGACGAGTAGCTTCAGGTTATGCCTCTGAGATCTTCTTGACCAAATACAAAGTCCCTCGCCCCTACATGCTCACTCTAGTTTTGCTTCTCTCTTGTGTTGGCCATGTTCTGATAGCCCTTGGTGTTCCAAACTCTCTCTACTTAGCTTCTGTGGTCATAGGGTTTTGTTTTGGAGCTCAATGGCCACTAATGTTTGCAATCATATCAGAAGTATTTGGCCTCAAATACTACTCCACGTTGTACAACTTTGGAGCTGCTGCAAGCCCTCTTGGGTCTTACATTCTGAACGTGAAAGTGGCTGGTGTTTTGTATGATAAAGAGGCTTTGAAACTATTGAAGGCCAAAGGACTCACGAGACAAGAAGGAAAGGACTTAACATGTGTGGGAGTGCAATGCTACAAAATGGCTTTTATCATAATCACGGCTTCAACGTTGGTTGGTTGTTTTGCTTCGATCATTTTGGCGCTGAGGACTAGAAAGTTTTACAAAGGGGATATCTATAGAAAGTTTAGAACGGAAGATGAAACAATAGAGAATGAGATAGAGATTACCAAGGCTGGTAATTAA
Predicted protein sequences of Glyma03g34230
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g34230.1 sequence type=predicted peptide gene model=Glyma03g34230 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVVADFTSGGLRGMKALSYHVLTGRWFMLFASLLIMSVAGATYMFGIYSNEVKTSLGYDQSTLNLLSFFKDLGANVGVISGLVNEVTPPFVVLSIGVIMNFFGYFMIFLAVSGRIDKPQVWQMCLYICIGANSQTFANTGALVTCVKNFPGSRGSILGILKGYVGLSGAIITQLYHAFYGDHDSQALILLIAWLPAAVSFLFLPTIRLMNTVHHQPKEDNRVFYHLLYISLGLAAFLMVLIVVQNKLSFSRIEYIVDGLVVFSFLLLPLAVVFREEINQLKAKTQGLTDSPPQLKVVTEAIPSSNVVEQEVVPAATTSSHEKSSCLRNIFNPPKRGEDYTILQALFSIDMLILFIATTFGAGGTLTAIDNLGQIGHSLGYPNKSTTTFVSLVSIWNYLGRVASGYASEIFLTKYKVPRPYMLTLVLLLSCVGHVLIALGVPNSLYLASVVIGFCFGAQWPLMFAIISEVFGLKYYSTLYNFGAAASPLGSYILNVKVAGVLYDKEALKLLKAKGLTRQEGKDLTCVGVQCYKMAFIIITASTLVGCFASIILALRTRKFYKGDIYRKFRTEDETIENEIEITKAGN*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
