Glyma03g33910 - SoyBase

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Report for Sequence Feature Glyma03g33910

Feature Type:	gene_model
Chromosome:	Gm03
Start:	41408499
stop:	41412453
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma03g33910

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G03300	AT	Annotation by Michelle Graham. TAIR10: adenosine kinase 2 \| chr5:796573-798997 FORWARD LENGTH=345	SoyBase	E_val: 0	ISS
GO:0006166	GO-bp	Annotation by Michelle Graham. GO Biological Process: purine ribonucleoside salvage	SoyBase	N/A	ISS
GO:0006169	GO-bp	Annotation by Michelle Graham. GO Biological Process: adenosine salvage	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0004001	GO-mf	Annotation by Michelle Graham. GO Molecular Function: adenosine kinase activity	SoyBase	N/A	ISS
GO:0005507	GO-mf	Annotation by Michelle Graham. GO Molecular Function: copper ion binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016773	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphotransferase activity, alcohol group as acceptor	SoyBase	N/A	ISS
KOG2854	KOG	Possible pfkB family carbohydrate kinase	JGI		ISS
PTHR10584	Panther	SUGAR KINASE RELATED	JGI		ISS
PTHR10584:SF24	Panther	RIBOKINASE	JGI		ISS
PF00294	PFAM	pfkB family carbohydrate kinase	JGI		ISS
UniRef100_B9T0A9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Adenosine kinase, putative n=1 Tax=Ricinus communis RepID=B9T0A9_RICCO	SoyBase	E_val: 0	ISS
UniRef100_I1JPN3	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JPN3_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma03g33910

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma03g33910

Paralog	Evidence	Comments
Glyma19g36630	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma03g33910 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g181900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma03g33910

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma03g33910

Limit To All Plant Sequences

>Glyma03g33910.2   sequence type=transcript   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTTAAAAAAATGTGGAAGGGCCACGTACAAAAGAGAAATGGTAAATATCAGTAAACACGTGCCGTTTCATTTGATCATCACATGAAAATGGTGTCCGAAGGCATTCTCCTGGGCATTGGTAACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAGTACCATCTGACTCACTCACTCTCTTTTCCATGCCGTTTTGCTCCACTCTCCTCGTCGTTTCGTTTAACCTTGCACACCGTTCCATAGGTTTACTGGATGGATCAACGACGTCGTAAATCGCTTTGTTCGCTTCTGAATGATTTTTTTACTTGTTTTTGTGTTTGATAGATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCTATGTTTGAAGAATTGGTTGAGAAATATAATGTGGAGTACATTGCTGGAGGTGCCACTCAGAATTCAATCAAGGTTGCTCAATGGATGCTCCAAGTTCCTGGTGCAACAAGTTACATGGGTGGCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCAAGGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGATGATAGGTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACCAGATTCCATCCAGCTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCAATGAACCTTTCTGCCCCTTTTATCTGCGAGTTTTTCAGGGATGTACAGGAGAAAGCTCTACCGTATACGGACTTTGTTTTCGGATATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACCGATAATGTTGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGACTACACAAAAGGATAACTGTCATCACACAGGGTGTGGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCTGTGCAACTTTTGCCTAAAGAGAAACTAGTTGATGCAAATGGAACAGGAGATGCATTTGTCGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAGTGCGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGTACGTACCCAGAGAAGCCTGATTTTCATTGAGTGTTTCTCTCGGTTCTGTTTCCATTATGAAGTTTTGATTGTTAGGAAATCTTTTGTTGTATTTTGATAGTTGCAGCATAACAGCTGCATTTGGATTTTTCAATCCCGACTGGGGAAAACGAGGAAAGAGTTTCAGTGAAAGGAAACAAATAATTGATCTGTTATATTCTAGTACTATTATTAGAGGCTTAGAGCATCGTTTCATATTTTTGCTGAGTTTGTTATTGAGTCTTTTTTATTCGATATTAAACCATGTTATTATGCTTAGACTGATGTTTAACTTGCCACTTCGAGTATAGTTAACGGACCTATTGATTAAGCAAGCTTAAAAGCA

>Glyma03g33910.3   sequence type=transcript   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTTAAAAAAATGTGGAAGGGCCACGTACAAAAGAGAAATGGTAAATATCAGTAAACACGTGCCGTTTCATTTGATCATCACATGAAAATGGTGTCCGAAGGCATTCTCCTGGGCATTGGTAACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAGTACCATCTGACTCACTCACTCTCTTTTCCATGCCGTTTTGCTCCACTCTCCTCGTCGTTTCGTTTAACCTTGCACACCGTTCCATAGGTTTACTGGATGGATCAACGACGTCGTAAATCGCTTTGTTCGCTTCTGAATGATTTTTTTACTTGTTTTTGTGTTTGATAGATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCTATTGGATGCTCCAAGTTCCTGGTGCAACAAGTTACATGGGTGGCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCAAGGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGATGATAGGTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACCAGATTCCATCCAGCTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCAATGAACCTTTCTGCCCCTTTTATCTGCGAGTTTTTCAGGGATGTACAGGAGAAAGCTCTACCGTATACGGACTTTGTTTTCGGATATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACCGATAATGTTGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGACTACACAAAAGGATAACTGTCATCACACAGGGTGTGGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCTGTGCAACTTTTGCCTAAAGAGAAACTAGTTGATGCAAATGGAACAGGAGATGCATTTGTCGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAGTGCGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGTACGTACCCAGAGAAGCCTGATTTTCATTGAGTGTTTCTCTCGGTTCTGTTTCCATTATGAAGTTTTGATTGTTAGGAAATCTTTTGTTGTATTTTGATAGTTGCAGCATAACAGCTGCATTTGGATTTTTCAATCCCGACTGGGGAAAACGAGGAAAGAGTTTCAGTGAAAGGAAACAAATAATTGATCTGTTATATTCTAGTACTATTATTAGAGGCTTAGAGCATCGTTTCATATTTTTGCTGAGTTTGTTATTGAGTCTTTTTTATTCGATATTAAACCATGTTATTATGCTTAGACTGATGTTTAACTTGCCACTTCGAGTATAGTTAACGGACCTATTGATTAAGCAAGCTTAAAAGCA

Coding sequences of Glyma03g33910

Limit To All Plant Sequences

>Glyma03g33910.1   sequence type=CDS   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAATGGTGTCCGAAGGCATTCTCCTGGGCATTGGTAACCCTCTCCTCGACATCTCCGCCGTCGTCGACCAAGACTTCTTTAAAAAATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCTATGTTTGAAGAATTGGTTGAGAAATATAATGTGGAGTACATTGCTGGAGGTGCCACTCAGAATTCAATCAAGGTTGCTCAATGGATGCTCCAAGTTCCTGGTGCAACAAGTTACATGGGTGGCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCAAGGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGATGATAGGTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACCAGATTCCATCCAGCTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCAATGAACCTTTCTGCCCCTTTTATCTGCGAGTTTTTCAGGGATGTACAGGAGAAAGCTCTACCGTATACGGACTTTGTTTTCGGATATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACCGATAATGTTGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGACTACACAAAAGGATAACTGTCATCACACAGGGTGTGGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCTGTGCAACTTTTGCCTAAAGAGAAACTAGTTGATGCAAATGGAACAGGAGATGCATTTGTCGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAGTGCGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGTACGTACCCAGAGAAGCCTGATTTTCATTGA

>Glyma03g33910.2   sequence type=CDS   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATTTTTTTACTTGTTTTTGTGTTTGATAGATATGATATCACCTCAAACAATGCGATTCTTGCGGAGGACAAGCACACGCCTATGTTTGAAGAATTGGTTGAGAAATATAATGTGGAGTACATTGCTGGAGGTGCCACTCAGAATTCAATCAAGGTTGCTCAATGGATGCTCCAAGTTCCTGGTGCAACAAGTTACATGGGTGGCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCAAGGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGATGATAGGTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACCAGATTCCATCCAGCTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCAATGAACCTTTCTGCCCCTTTTATCTGCGAGTTTTTCAGGGATGTACAGGAGAAAGCTCTACCGTATACGGACTTTGTTTTCGGATATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACCGATAATGTTGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGACTACACAAAAGGATAACTGTCATCACACAGGGTGTGGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCTGTGCAACTTTTGCCTAAAGAGAAACTAGTTGATGCAAATGGAACAGGAGATGCATTTGTCGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAGTGCGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGTACGTACCCAGAGAAGCCTGATTTTCATTGA

>Glyma03g33910.3   sequence type=CDS   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTCCAAGTTCCTGGTGCAACAAGTTACATGGGTGGCATAGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCAAGGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTTTGTATAGTTGGTGATGATAGGTCTCTTGTGGCGAACTTAGCAGCTGCAAATTGCTACAAATCTGATCATTTGAAGAGACCAGAAAATTGGGCACTAGTTGAAAAGGCCAAGTATATTTATATTGCTGGGTTTTTCCTCACTGTATCACCAGATTCCATCCAGCTAGTTGCTGAGCATGCTGCTGCAAATAACAAGATCTTCTCAATGAACCTTTCTGCCCCTTTTATCTGCGAGTTTTTCAGGGATGTACAGGAGAAAGCTCTACCGTATACGGACTTTGTTTTCGGATATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACCGATAATGTTGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCAGGACTACACAAAAGGATAACTGTCATCACACAGGGTGTGGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAGTTCCCTGTGCAACTTTTGCCTAAAGAGAAACTAGTTGATGCAAATGGAACAGGAGATGCATTTGTCGGAGGATTTCTTTCTCAATTGGTTCAGGAGAAGCCCATTGAAGAGTGCGTGAGAGCTGGCTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGTACGTACCCAGAGAAGCCTGATTTTCATTGA

Predicted protein sequences of Glyma03g33910

Limit To All Plant Sequences

>Glyma03g33910.1   sequence type=predicted peptide   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKMVSEGILLGIGNPLLDISAVVDQDFFKKYDITSNNAILAEDKHTPMFEELVEKYNVEYIAGGATQNSIKVAQWMLQVPGATSYMGGIGKDKFGEEMKKNSRLAGVNVHYYEDETTPTGTCAVCIVGDDRSLVANLAAANCYKSDHLKRPENWALVEKAKYIYIAGFFLTVSPDSIQLVAEHAAANNKIFSMNLSAPFICEFFRDVQEKALPYTDFVFGYETEARTFSKVHGWETDNVEEIALKISQWPKASGLHKRITVITQGVDPVCVAEDGKVKKFPVQLLPKEKLVDANGTGDAFVGGFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFH*

>Glyma03g33910.2   sequence type=predicted peptide   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MIFLLVFVFDRYDITSNNAILAEDKHTPMFEELVEKYNVEYIAGGATQNSIKVAQWMLQVPGATSYMGGIGKDKFGEEMKKNSRLAGVNVHYYEDETTPTGTCAVCIVGDDRSLVANLAAANCYKSDHLKRPENWALVEKAKYIYIAGFFLTVSPDSIQLVAEHAAANNKIFSMNLSAPFICEFFRDVQEKALPYTDFVFGYETEARTFSKVHGWETDNVEEIALKISQWPKASGLHKRITVITQGVDPVCVAEDGKVKKFPVQLLPKEKLVDANGTGDAFVGGFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFH*

>Glyma03g33910.3   sequence type=predicted peptide   gene model=Glyma03g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLQVPGATSYMGGIGKDKFGEEMKKNSRLAGVNVHYYEDETTPTGTCAVCIVGDDRSLVANLAAANCYKSDHLKRPENWALVEKAKYIYIAGFFLTVSPDSIQLVAEHAAANNKIFSMNLSAPFICEFFRDVQEKALPYTDFVFGYETEARTFSKVHGWETDNVEEIALKISQWPKASGLHKRITVITQGVDPVCVAEDGKVKKFPVQLLPKEKLVDANGTGDAFVGGFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFH*

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