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Report for Sequence Feature Glyma03g32103

Feature Type:gene_model
Chromosome:Gm03
Start:39909244
stop:39912686
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma03g32103
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G20400AT Annotation by Michelle Graham. TAIR10: JUMONJI 14 | chr4:11009004-11013588 FORWARD LENGTH=954 SoyBaseE_val: 1.00E-19ISS
GO:0006355GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent SoyBaseN/AISS
GO:0009910GO-bp Annotation by Michelle Graham. GO Biological Process: negative regulation of flower development SoyBaseN/AISS
GO:0010216GO-bp Annotation by Michelle Graham. GO Biological Process: maintenance of DNA methylation SoyBaseN/AISS
GO:0034720GO-bp Annotation by Michelle Graham. GO Biological Process: histone H3-K4 demethylation SoyBaseN/AISS
GO:0043687GO-bp Annotation by Michelle Graham. GO Biological Process: post-translational protein modification SoyBaseN/AISS
GO:0045893GO-bp Annotation by Michelle Graham. GO Biological Process: positive regulation of transcription, DNA-dependent SoyBaseN/AISS
GO:0048573GO-bp Annotation by Michelle Graham. GO Biological Process: photoperiodism, flowering SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003677GO-mf Annotation by Michelle Graham. GO Molecular Function: DNA binding SoyBaseN/AISS
GO:0003700GO-mf Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity SoyBaseN/AISS
GO:0032453GO-mf Annotation by Michelle Graham. GO Molecular Function: histone demethylase activity (H3-K4 specific) SoyBaseN/AISS
PTHR10694Panther JUMONJI DOMAIN CONTAINING PROTEIN JGI ISS
PTHR10694:SF8Panther RETINOBLASTOMA BINDING PROTEIN-RELATED JGI ISS
PF02375PFAM jmjN domain JGI ISS
UniRef100_B9T1C1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9T1C1_RICCO SoyBaseE_val: 2.00E-31ISS
UniRef100_I1JP47UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JP47_SOYBN SoyBaseE_val: 8.00E-121ISS

Expression Patterns of Glyma03g32103
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g32103 not represented in the dataset
Glyma03g32103 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma03g32103
ParalogEvidenceComments
Glyma19g34870 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma03g32103 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.03g164100 Wm82.a2.v1IGC As supplied by JGI

References for Glyma03g32103
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Transcripts of Glyma03g32103
>Glyma03g32103.2   sequence type=transcript   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGAAGTAATTTGATACTTTACTCTATTATGTCCTAATGCTAAACTTTTAGGGTTTTATAGTCCACATCCTTCGTGTTCGGGCAAGAATGGGAGGGAAGACCCAATTTTGAACCTCAAATTCACAGATCATTAATCACTGACGCGATTCTTTTCGCTCAGAATTCACCGTTCATTTGCTGCAGAAATCTGGTTTTGGAGCAGTCTCCGTGTTTCAACATTCTGGTGAATATGGAAAGGATTGCACCAAATTTGAGAAGAGAGACAATCTTTCAGTTCCCTCTGGTTTTACATCCCTGACATCTTTTATTTTGAAAAGGGTGGAAATGTTAAGAAAAGTGATAAATCTACAACCTTTTGAATTGCAGTAATTGTGAGAATGTATGTACCTTTCACTTTTCCTTGAACAGTCATGACCATGTCTCCTTTTTTTTTTTTTGTTTATCAAAGTCTTGACCCAGGTAACAGCAAGGTGGCATCCTAGGGATGCACCATAAGAGAAGTTTTGGAAGAAGCTCCTATTTTCCACCCAACAGAAGAGGTACCTACCACCCAACAGAAGACGTGTACATGGAAACACTCTTCTGTTTTCATGCACATTTCTTAATTTATGTCATCAAATGTGGATTCTTATGATTGTTAAGATTGTAGAATAAAATGTTTGAAGAATTGTGCACATTATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAGAGGCCCATGATTATTATTTTAATATACAGCAGCCTCTAAAAGTAAGAACAATTTATATCAAATGCTTTATATCATTATTCA

>Glyma03g32103.3   sequence type=transcript   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGAAGTAATTTGATACTTTACTCTATTATGTCCTAATGCTAAACTTTTAGGGTTTTATAGTCCACATCCTTCGTGTTCGGGCAAGAATGGGAGGGAAGACCCAATTTTGAACCTCAAATTCACAGATCATTAATCACTGACGCGATTCTTTTCGTCTTGACCCAGGTAACAGCAAGGTGGCATCCTAGGGATGCACCATAAGAGAAGTTTTGGAAGAAGCTCCTATTTTCCACCCAACAGAAGAGGTACCTACCACCCAACAGAAGACGTGTACATGGAAACACTCTTCTGTTTTCATGCACATTTCTTAATTTATGTCATCAAATGTGGATTCTTATGATTGTTAAGATTGTAGAATAAAATGTTTGAAGAATTGTGCACATTATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAGAGGCCCATGATTATTATTTTAATATACAGCAGCCTCTAAAAGTAAGAACAATTTATATCAAATGCTTTATATCATTATTCA

>Glyma03g32103.4   sequence type=transcript   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GGAAGTAATTTGATACTTTACTCTATTATGTCCTAATGCTAAACTTTTAGGGTTTTATAGTCCACATCCTTCGTGTTCGGGCAAGAATGGGAGGGAAGACCCAATTTTGAACCTCAAATTCACAGATCATTAATCACTGACGCGATTCTTTTCGAAATCTGGTTTTGGAGCAGTCTCCGTGTTTCAACATTCTGGTCTTGACCCAGGTAACAGCAAGGTGGCATCCTAGGGATGCACCATAAGAGAAGTTTTGGAAGAAGCTCCTATTTTCCACCCAACAGAAGAGGTACCTACCACCCAACAGAAGACGTGTACATGGAAACACTCTTCTGTTTTCATGCACATTTCTTAATTTATGTCATCAAATGTGGATTCTTATGATTGTTAAGATTGTAGAATAAAATGTTTGAAGAATTGTGCACATTATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAGAGGCCCATGATTATTATTTTAATATACAGCAGCCTCTAAAAGTAAGAACAATTTATATCAAATGCTTTATATCATTATTCA

>Glyma03g32103.5   sequence type=transcript   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTTTATAGTCCACATCCTTCGTGTTCGGGCAAGAATGGGAGGGAAGACCCAATTTTGAACCTCAAATTCACAGATCATTAATCACTGACGCGATTCTTTTCGAAATCTGGTTTTGGAGCAGTCTCCGTGTTTCAACATTCTGGTGAATATGGAAAGGATTGCACCAAATTTGAGAAGAGAGACAATCTTTCAGTTCCCTCTGGTTTTACATCCCTGACATCTTTTATTTTGAAAAGGGTGGAAATGTTAAGAAAAGTGATAAATCTACAACCTTTTGAATTGCAGTAATTGTGAGAATGTAACAGCAAGGTGGCATCCTAGGGATGCACCATAAGAGAAGTTTTGGAAGAAGCTCCTATTTTCCACCCAACAGAAGAGGTACCTACCACCCAACAGAAGACGTGTACATGGAAACACTCTTCTGTTTTCATGCACATTTCTTAATTTATGTCATCAAATGTGGATTCTTATGATTGTTAAGATTGTAGAATAAAATGTTTGAAGAATTGTGCACATTATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAG
Coding sequences of Glyma03g32103
>Glyma03g32103.1   sequence type=CDS   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAG

>Glyma03g32103.2   sequence type=CDS   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAG

>Glyma03g32103.3   sequence type=CDS   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAG

>Glyma03g32103.4   sequence type=CDS   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAG

>Glyma03g32103.5   sequence type=CDS   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGGAATTCAAATACCCACTTAAATATATTGCAAGCATATGTTCCAGAGCAGAACCTTATGGAATTTTCCATATTGTCCCTCCCACTTGCTGGAAACCACCATGCTCTCTTGAGAAAAAGAACATATTAGAAAAGTCTGAATTTGTTGCTCAGATTCAGCGAATTGATGGACACCAAGTTCAGCATGCACAAGAAACTATGGCTAGTGCTCATGGAAATACAAAAACCAAGAGAAAAAGAGATGTAAAAGTAGCTTTAGACTCTCAGCTTGGTAATAGAAACACCAGCATTCCAAATAACCAGAATGTTGAAAAATGTGACTGTAAGTCTGAACCTGGTCCTAAATTCAGTCTCAAAGCATTTAAGAAATATGATGACATATTTAAGAGCCAGTACTTCAGTTACAAGGATAATAAGAAGATTGTAGGTTCCAATATAAAATTAGCCATACGTCAGCTGTGGGAACCATCTGGGGAGAATATTGAGGGTGAATATGGACGGATTGTTAAATGGATTATTTTAACTTTATTTATTTATTTTAAATTTTAG
Predicted protein sequences of Glyma03g32103
>Glyma03g32103.1   sequence type=predicted peptide   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEFKYPLKYIASICSRAEPYGIFHIVPPTCWKPPCSLEKKNILEKSEFVAQIQRIDGHQVQHAQETMASAHGNTKTKRKRDVKVALDSQLGNRNTSIPNNQNVEKCDCKSEPGPKFSLKAFKKYDDIFKSQYFSYKDNKKIVGSNIKLAIRQLWEPSGENIEGEYGRIVKWIILTLFIYFKF*

>Glyma03g32103.2   sequence type=predicted peptide   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEFKYPLKYIASICSRAEPYGIFHIVPPTCWKPPCSLEKKNILEKSEFVAQIQRIDGHQVQHAQETMASAHGNTKTKRKRDVKVALDSQLGNRNTSIPNNQNVEKCDCKSEPGPKFSLKAFKKYDDIFKSQYFSYKDNKKIVGSNIKLAIRQLWEPSGENIEGEYGRIVKWIILTLFIYFKF*

>Glyma03g32103.3   sequence type=predicted peptide   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEFKYPLKYIASICSRAEPYGIFHIVPPTCWKPPCSLEKKNILEKSEFVAQIQRIDGHQVQHAQETMASAHGNTKTKRKRDVKVALDSQLGNRNTSIPNNQNVEKCDCKSEPGPKFSLKAFKKYDDIFKSQYFSYKDNKKIVGSNIKLAIRQLWEPSGENIEGEYGRIVKWIILTLFIYFKF*

>Glyma03g32103.4   sequence type=predicted peptide   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEFKYPLKYIASICSRAEPYGIFHIVPPTCWKPPCSLEKKNILEKSEFVAQIQRIDGHQVQHAQETMASAHGNTKTKRKRDVKVALDSQLGNRNTSIPNNQNVEKCDCKSEPGPKFSLKAFKKYDDIFKSQYFSYKDNKKIVGSNIKLAIRQLWEPSGENIEGEYGRIVKWIILTLFIYFKF*

>Glyma03g32103.5   sequence type=predicted peptide   gene model=Glyma03g32103   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKEFKYPLKYIASICSRAEPYGIFHIVPPTCWKPPCSLEKKNILEKSEFVAQIQRIDGHQVQHAQETMASAHGNTKTKRKRDVKVALDSQLGNRNTSIPNNQNVEKCDCKSEPGPKFSLKAFKKYDDIFKSQYFSYKDNKKIVGSNIKLAIRQLWEPSGENIEGEYGRIVKWIILTLFIYFKF*






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