Glyma03g27641 - SoyBase

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Report for Sequence Feature Glyma03g27641

Feature Type:	gene_model
Chromosome:	Gm03
Start:	35418961
stop:	35422634
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma03g27641

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G17850	AT	Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein \| chr3:6109854-6116245 REVERSE LENGTH=1296	SoyBase	E_val: 4.00E-20	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0046777	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein autophosphorylation	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0004713	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
UniRef100_B9R9Q3	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Kinase, putative n=1 Tax=Ricinus communis RepID=B9R9Q3_RICCO	SoyBase	E_val: 4.00E-25	ISS
UniRef100_UPI000233D037	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233D037 related cluster n=1 Tax=unknown RepID=UPI000233D037	SoyBase	E_val: 5.00E-36	ISS

Expression Patterns of Glyma03g27641

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g27641 not represented in the dataset	Glyma03g27641 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g27641 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g121400	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma03g27641

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma03g27641

Limit To All Plant Sequences

>Glyma03g27641.1   sequence type=CDS   gene model=Glyma03g27641   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTGCCCCACTCACCTCTCCTTCCTCCTTGCTATCCGATAACGGCGACCCCTTCCACTCGCCGCAAACTGACCTCCGCAACAACTCCCGCATCATCGTCATCATCGAGACAACATCAACTCAGTTCACCCAGGTCGCGCCAAAATTCGAGCACCGAAACCCACCGCGGTGGAATCCTTCAAGGAGTTAGACCATTTTCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGCGGCAATCAGAGTTATGTTTGAAAAACTAAAGGAAGAAGTTGATTCTGACTTGGATGGTTTTGCTGGAGATTTGGTGGGCATTCTTGAAAAGAATGTAGTGTCTGATCGTGAATGGAAAGAGAGGTTGGAGGATCTGTGGGTTGTTACTCTACAATGTGTATGTGTGCGCTAG

Predicted protein sequences of Glyma03g27641

Limit To All Plant Sequences

>Glyma03g27641.1   sequence type=predicted peptide   gene model=Glyma03g27641   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVPHSPLLPPCYPITATPSTRRKLTSATTPASSSSSRQHQLSSPRSRQNSSTETHRGGILQGVRPFSIWKHRAFGHMEEVMAAIRVMFEKLKEEVDSDLDGFAGDLVGILEKNVVSDREWKERLEDLWVVTLQCVCVR*

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