|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G69850 | AT | Annotation by Michelle Graham. TAIR10: nitrate transporter 1:2 | chr1:26296945-26300407 REVERSE LENGTH=585 | SoyBase | E_val: 8.00E-26 | ISS |
GO:0009624 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to nematode | SoyBase | N/A | ISS |
GO:0010119 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of stomatal movement | SoyBase | N/A | ISS |
GO:0080168 | GO-bp | Annotation by Michelle Graham. GO Biological Process: abscisic acid transport | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0005215 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transporter activity | SoyBase | N/A | ISS |
GO:0005509 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: calcium ion binding | SoyBase | N/A | ISS |
GO:0090440 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: abscisic acid transporter activity | SoyBase | N/A | ISS |
PTHR11654 | Panther | OLIGOPEPTIDE TRANSPORTER-RELATED | JGI | ISS | |
PTHR11654:SF21 | Panther | NITRATE TRANSPORTER (NTL1) | JGI | ISS | |
UniRef100_D7KXK7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: ATNRT1:2 n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KXK7_ARALL | SoyBase | E_val: 3.00E-23 | ISS |
UniRef100_I1KXP9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=2 Tax=Glycine max RepID=I1KXP9_SOYBN | SoyBase | E_val: 4.00E-30 | ISS |
Glyma03g25080 not represented in the dataset |
Glyma03g25080 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma03g25080.1 sequence type=CDS gene model=Glyma03g25080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GAATTAGAACAAAACCAGAGATCATGGGAAGGCTATGTGAACTGGAGGAACAAGTCTGCTCCCAGAGACTGCCATGGTGGCATGCTTGCAGCCTCCTTTGCTTTAGTCGTCGAGATATTGGAGAGTCTGGCATTTCTAGCTAATGCATGCAATTTGGTGCTATATCTGAGGCAATACATGCACATGTCCCCTTCATATATTTTAAGCAAAGAGTGTCCACTCTGTTGGCAATCACTTGCTTTGAAAGATCCTGCCAGCCATTTATGGGTATCATTAGCATTTTCAATTTTCATCAATTGCTTATTCTTTTGTAGCCAAGAGCTTCTAGCTGCAGTGGAAGATGAGAAATGCATGAGATAA
>Glyma03g25080.1 sequence type=predicted peptide gene model=Glyma03g25080 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ELEQNQRSWEGYVNWRNKSAPRDCHGGMLAASFALVVEILESLAFLANACNLVLYLRQYMHMSPSYILSKECPLCWQSLALKDPASHLWVSLAFSIFINCLFFCSQELLAAVEDEKCMR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||