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Report for Sequence Feature Glyma03g19751

Feature Type:gene_model
Chromosome:Gm03
Start:24983893
stop:25038122
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G07020AT Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein | chr3:2218120-2221590 REVERSE LENGTH=637 SoyBaseE_val: 0ISS
GO:0005975GO-bp Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process SoyBaseN/AISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0016125GO-bp Annotation by Michelle Graham. GO Biological Process: sterol metabolic process SoyBaseN/AISS
GO:0030259GO-bp Annotation by Michelle Graham. GO Biological Process: lipid glycosylation SoyBaseN/AISS
GO:0048316GO-bp Annotation by Michelle Graham. GO Biological Process: seed development SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
GO:0016906GO-mf Annotation by Michelle Graham. GO Molecular Function: sterol 3-beta-glucosyltransferase activity SoyBaseN/AISS
GO:0051507GO-mf Annotation by Michelle Graham. GO Molecular Function: beta-sitosterol UDP-glucosyltransferase activity SoyBaseN/AISS
KOG1192 KOG UDP-glucuronosyl and UDP-glucosyl transferase JGI ISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PF00201PFAM UDP-glucoronosyl and UDP-glucosyl transferase JGI ISS
PF03033PFAM Glycosyltransferase family 28 N-terminal domain JGI ISS
UniRef100_H2BPZ4UniRef Annotation by Michelle Graham. Most informative UniRef hit: Sterol glucosyltransferase 1 n=1 Tax=Lotus japonicus RepID=H2BPZ4_LOTJA SoyBaseE_val: 0ISS
UniRef100_UPI000233A657UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233A657 related cluster n=1 Tax=unknown RepID=UPI000233A657 SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g19751 not represented in the dataset

Glyma03g19751 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.03g083100 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma03g19751.1   sequence type=CDS   gene model=Glyma03g19751   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCGGACTCGCCGGATGATTCTTCGAGGTATCCCGGAAACGGCAAGGACATGGAGGACATTACATCCTCTGTTGCCAATGCAAGTAGCTCTTCAGGCTCAGGCATTCCTGGCAAAGGGTTGTCTAAAGTGACCACATTGCCGGCAGACATATCACAAGATAAATCGGAGTCAAGTTCAAGTAAGTTTAAGATGGAAAGGTCAAAAACAGAGAGGCAGAGACACCTAAGTCCTGAAGATGCAGCACAAATTTTTGATGACAAAGTTCCTATCCAAGAGAAGCTTAAATTGTTGAACAGAATTGCTACTATAAAAGACGATGGAACTGTAGAATTTGAAGTTCCTGTAGATGTTGAACCTGAGGCTAATTTTGCTCGATCCAAACAAGTAAATCATGTCGTTGATGACTCACTTGATGCAACAGACTTTCATTACATCCCACCATTGAATATAGTGATGCTTATTGTTGGTACACGAGGAGATGTGCAACCCTTTATTGCAATAGGCAAACGCATGCAGGACTATGGGCATCGTGTTAGATTAGCAACCCATTCAAATTTTAAGGAGTTTGTTTTGACAGCTGGGTTGGAGTTTTATCCATTAGGCGGTGATCCAAAAGTTCTTGCTGGTTATATGGTTAAAAATAAGGGATTTCTGCCATCGGGACCTTCTGAGATACCTATTCAGCGAAATCAAATGAAAGAAATTATTAACTCTCTGCTTCCAGCCTGTAAAGAACCTGATATTGATTCTGGTGTCCCATTTAAAGCTGATGCAATCATTGCTAACCCCCCTGCATATGGACATACCCATGTGGCAGAGGCACTTAAAATTCCAATTCATATTTTTTTCACAATGCCATGGACGCCAACCACCGAATTTCCGCATCCGCTGTCACGTGTAAAGCAACAGGCTGGTTATAGGCTTTCATATCAAATAGTTGACTCTTTGATTTGGCTCGGAATACGCGACATGATTAATGATCTTAGGAAGAAAAAGTTGAAGCTACGACCAGTCACATATTTAAGTGGCTCACAAGGCTCTGAAACTGATGTTCCACATGCATATATATGGAGTCCTCATCTTGTTCCTAAACCAAAAGATTGGGGACCAAAAATTGATGTAGTAGGGTTTTGCTTTCTTGATCTTGCGTCAAACTATGAACCACCAGAGTCCCTTGTAAAATGGCTTGAAGAAGGTGACAAACCTATTTACATTGGATTTGGTAGCCTGCCTGTTCAAGAACCAAAAAGGATGACACAAATAATTGTAGATGCATTGGAGATCACTGGACAGAGGGGCATCATCAATAAAGGATGGGGAGGTCTTGGGAATTTGGCAGAACCAAAGGACTCTATATACTTATTGGATAATTGCCCGCATGATTGGCTTTTCTTGCGTTGCAAGGCTGTGGTTCATCACGGAGGTGCTGGAACAACAGCTGCCGGGCTCAAAGCTGCTTGCCCAACAACCATAGTTCCTTTTTTCGGCGATCAACCATTTTGGGGTGAGAGAGTACATGTTAGAGGAGTTGGTCCTCCACCTATCCCAGTTGATGAGTTTTCGCTTCCCAAGTTAGTTGATGCATTAAAACTTATGCTGGATCCCAAGGTAAAGGAACGTGCAATTGAACTTGCTAAGGCCATGGAAAATGAGGATGGAGTGACAGGAGCTGTGAAAGCATTTTTTAAACAGCTTCCTCAAAAAAAACCAGAGCCTGATGCAGATCCGCAACCCACTAGTTTTTTCTCTGTAGGAAGATGTTTTGGTTGTTCCTGA

>Glyma03g19751.1   sequence type=predicted peptide   gene model=Glyma03g19751   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MADSPDDSSRYPGNGKDMEDITSSVANASSSSGSGIPGKGLSKVTTLPADISQDKSESSSSKFKMERSKTERQRHLSPEDAAQIFDDKVPIQEKLKLLNRIATIKDDGTVEFEVPVDVEPEANFARSKQVNHVVDDSLDATDFHYIPPLNIVMLIVGTRGDVQPFIAIGKRMQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQMKEIINSLLPACKEPDIDSGVPFKADAIIANPPAYGHTHVAEALKIPIHIFFTMPWTPTTEFPHPLSRVKQQAGYRLSYQIVDSLIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSETDVPHAYIWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPESLVKWLEEGDKPIYIGFGSLPVQEPKRMTQIIVDALEITGQRGIINKGWGGLGNLAEPKDSIYLLDNCPHDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHVRGVGPPPIPVDEFSLPKLVDALKLMLDPKVKERAIELAKAMENEDGVTGAVKAFFKQLPQKKPEPDADPQPTSFFSVGRCFGCS*







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