Report for Sequence Feature Glyma03g17300
Feature Type: gene_model
Chromosome: Gm03
Start: 21896280
stop: 21898584
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g17300
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G53950 AT
Annotation by Michelle Graham. TAIR10: glyoxal oxidase-related protein | chr3:19975704-19977341 FORWARD LENGTH=545
SoyBase E_val: 0 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF07250 PFAM
Glyoxal oxidase N-terminus
JGI ISS
PF09118 PFAM
Domain of unknown function (DUF1929)
JGI ISS
UniRef100_C8CPQ3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Glyoxal oxidase n=1 Tax=Vitis vinifera RepID=C8CPQ3_VITVI
SoyBase E_val: 0 ISS
UniRef100_I1JM07 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JM07_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma03g17300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma03g17300 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.03g071700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma03g17300
Coding sequences of Glyma03g17300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g17300.1 sequence type=CDS gene model=Glyma03g17300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGAACCTCTCATACTTTCTCTTCCTTCTCTTTCTCTTCGCAACCCACGCACGTGCCGACCTCCCCGGTACGTGGGAGCTTCTCGTCCCGGACGCCGGCATCGCTTCCATGCACACGGCGGTGACACGCTTCAACACGGTGGTCCTCCTCGACCGAACCAACATAGGCCCATCCCGAAAACTCCTCCCGAAAGGCCACTGCCGCTCCGACAAAAACGACGCCGTCCTGAAGCTCGACTGCTACGCCCACTCCGTCCACCTCGACCTCGCCACCAACCAAATCCGCCCTCTGAAAATCCTCACCGACACCTGGTGTTCCTCCGGCCAGTTCCTCCCCGACGGCACCCTCCTCCAGACCGGCGGCGACCTTGACGGCCTAAAAAAGATCCGCAAATTCTCCCCTTGTGATGTGTCGTCGTCGAGCTCTTTGCATTCTCCTTGCGATTGGGAAGAGCTCGACGACATCGAATTGGCTGAGGGCCGGTGGTACGCGACCAACCAGATCCTCCCGGACGGATCGGTTATCATAATCGGCGGACGCGGCTCCAACACAGTCGAATTCTTCCCACCCAAACGAAACGGCGCCGTTTCTTTCCCTTTCTTATCCGAAACCGAAGACACGCAAATGGATAACCTTTACCCTTACGTCCACCTTCTACCAAACGGTCACCTTTTTGTTTTCGCTAACACGAGATCGGTGATGTACGATTTCAACCGCCACGTCATCGTTAAGGAATACCCTAAATTACACGGTGGCCCGAGAAATTACCCTTCCGCAGGGTCATCGGCAATGCTAGCTTTACAAGGGAATTATTCTAAAGCTGAGATTGTGGTTTGTGGAGGTGCGAAATACGGTGCGTTTTTGCTGCGGAGTACTGACACCCCGGCGCATGGTAGCTGTGGGCGCATTTTAGCGATGGAAGAGAAACCGAGATGGGAAATGGAAGACATGCCGTATGGGAGGATTATGGGGGATATGGTGATGCTTCCGACCGGCGACGTTTTGGTTATTAATGGAGCGATGTCGGGGACTCAGGGTTTTGAGATGGCTAGTGATCCGTGTTTGAACCCGGTTCTTTACCGGCCCGACCAACCGGTTGGGTTGCGGTTCATGGTTTTGAACCCAGGGACTGTTCCGAGGATGTACCACGCTACAGCGAATCTGTTGCCTGATGCGAGGGTTTTGCTTGCCGGGAGTAACCCCCATGTTTTGTACCGGTTCGATGACGTGGAGTTTCCGACCGAATTGCGGCTCGAGGCGTTTTCGCCCGAGTATTTGTCTGCAGACCGGGCGAATCTTAGACCGGTTATTGAGGAGGTGCCCCAAACAGTGCGTTTTGGGGGCAAGTTTGATGTGGTGGTTTCGGTTGATTTGCCTGTGGTGGGGATTGTGGAAGTAAACTTGGCTAGCGCGCCTTTTGCCACGCACTCGTTCTCTCAGGGTCAACGTTTGGTCAAACTGACGGTTTCCTCTGCCGTGCCTGACGGCAGTGACGGGAGGTACCGGATTGGAGTAACGGCTCCGCCGAGTGGGGCGGTGGCGCCGCCGGGTTACTACATGGCGTTCGCAGTGAACCAGGGAGTACCCAGCATTGCAAAGTGGATACACGTGTCATAA
Predicted protein sequences of Glyma03g17300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g17300.1 sequence type=predicted peptide gene model=Glyma03g17300 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MENLSYFLFLLFLFATHARADLPGTWELLVPDAGIASMHTAVTRFNTVVLLDRTNIGPSRKLLPKGHCRSDKNDAVLKLDCYAHSVHLDLATNQIRPLKILTDTWCSSGQFLPDGTLLQTGGDLDGLKKIRKFSPCDVSSSSSLHSPCDWEELDDIELAEGRWYATNQILPDGSVIIIGGRGSNTVEFFPPKRNGAVSFPFLSETEDTQMDNLYPYVHLLPNGHLFVFANTRSVMYDFNRHVIVKEYPKLHGGPRNYPSAGSSAMLALQGNYSKAEIVVCGGAKYGAFLLRSTDTPAHGSCGRILAMEEKPRWEMEDMPYGRIMGDMVMLPTGDVLVINGAMSGTQGFEMASDPCLNPVLYRPDQPVGLRFMVLNPGTVPRMYHATANLLPDARVLLAGSNPHVLYRFDDVEFPTELRLEAFSPEYLSADRANLRPVIEEVPQTVRFGGKFDVVVSVDLPVVGIVEVNLASAPFATHSFSQGQRLVKLTVSSAVPDGSDGRYRIGVTAPPSGAVAPPGYYMAFAVNQGVPSIAKWIHVS*