Report for Sequence Feature Glyma03g14760
Feature Type: gene_model
Chromosome: Gm03
Start: 18934657
stop: 18937672
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma03g14760
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G57230 AT
Annotation by Michelle Graham. TAIR10: Thioredoxin superfamily protein | chr5:23190572-23191485 FORWARD LENGTH=160
SoyBase E_val: 5.00E-95 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005739 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_I1JLS6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JLS6_SOYBN
SoyBase E_val: 3.00E-115 ISS
Expression Patterns of Glyma03g14760
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma03g14760
Paralog Evidence Comments
Glyma01g27170 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma03g14760 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.03g076300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma03g14760
Transcripts of Glyma03g14760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g14760.2 sequence type=transcript gene model=Glyma03g14760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTTCTTTTACCAACTTTTAGTTACTGAATCAATCAAACCGTTGTTGAATTTCAATTTCGAAGTTTGTTTATCCTCTTTTAGTAACAGATGCATTTGTTGCGTTCTGCACCGCTTCTTTGCTAGTATTTAGTTTGATCATTTTGCAATGCCACCTGATTTTGGATTTCTCACTTTTTGTGGTTATACTTATTTTCTTCCGTGCTATGCCTATTAATTAATGATTCTAAACACACGCAGGCTAAGCATGTTTATTAATTTTGAATTTGATCGAGCATTTTATTATTATGCATGTAAATGAGATTATGCACGGTGGATTATAATAATCAGGAGATGCTATTATAATATGCTTTAGCAGTTTTGACTGGTTAGTACCTTTGGATACTGAAGATGGGATGCCATTATGATTTGCTCACTAGCTGTTTGATAAAATGCTCCAGTTGAATCTTTTTGTATAAGATGTGGTTTTGGTGCGTTTGATAGTGTGCACTGTTAGAATTATCGTGTGCTTAATGTAATCAACTTAAGGAATTAGTTCCCTGAGCTAGTGGTACGGAGTGAAGTATGAAATTTTGACCAATTTGTTTGGTTAGTAATTATCTGTGGATAAGAAGGTAGATAGTATTAATGTAAACAACACTTGGATATAACATTTGTTTATGTTGCAGGGACTGGATAGTTTCACCTGTTGCGCACTACTCTGTGAAATGGAAGATCCATCATTTTTCGATCGAATGATCAGTCATCTGAGAGCAACTTGCATGCACTATACTGGTTATCCAAAGGACCTTGGACCATCACAGGTTATTCATTTTACCTCCGAGCGTGAGTTTGTCAATCTCCTTCACGAAGGTTTCCCTGTGGTTGTTGCATTTACCATCAGGGGGAACTACACACGGCATCTTGACAAAGTATTAGAAGAATCTGCTGCTGAGTTTTATCCAAATGTAAAATTTATGCGTGTTGAATGTCCAAAATATCCTGGGTTTTGTATAACTCGGCAGAAAAAGGAGTATCCATTTGTTGAGATATTTCACAGTCCAACACATGCAGCTAACCAGGGAAGGGTAGCTGATCCAAACATTACTAAGTACAACGTGAAGGTCTTGCCTTTCAACTACGATGTTAGTGCTTATGGATTTAGAGAATTCTTCAAGCGACATGGTATACGGGCATCAGATCCAAAGTAGGGGGGGGGGGGGGGGGGAAGTTCTATCTTTTATACACCTAAGTTCCATACCCCATCATGCTACCTGTTTTAACAATCTGTAATTCTGTATATCTTCACAAATTCTCAATTTGGGGACAATTTTATTTATCTGTACGGTTGATGCTCAAACCTATAACTATGGTTTTGTAATTTTGTTCTCGTCATGGACACCTTTTTTGTCTTTTCCTTTTATTTAAGCATTTTCAATTTCAAATTCTCATTCACTTACCAAACATT
Coding sequences of Glyma03g14760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma03g14760.1 sequence type=CDS gene model=Glyma03g14760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGATCCATCATTTTTCGATCGAATGATCAGTCATCTGAGAGCAACTTGCATGCACTATACTGGTTATCCAAAGGACCTTGGACCATCACAGGTTATTCATTTTACCTCCGAGCGTGAGTTTGTCAATCTCCTTCACGAAGGTTTCCCTGTGGTTGTTGCATTTACCATCAGGGGGAACTACACACGGCATCTTGACAAAGTATTAGAAGAATCTGCTGCTGAGTTTTATCCAAATGTAAAATTTATGCGTGTTGAATGTCCAAAATATCCTGGGTTTTGTATAACTCGGCAGAAAAAGGAGTATCCATTTGTTGAGATATTTCACAGTCCAACACATGCAGCTAACCAGGGAAGGGTAGCTGATCCAAACATTACTAAGTACAACGTGAAGGTCTTGCCTTTCAACTACGATGTTAGTGCTTATGGATTTAGAGAATTCTTCAAGCGACATGGTATACGGGCATCAGATCCAAAGTAG
>Glyma03g14760.2 sequence type=CDS gene model=Glyma03g14760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGTTGCAGGGACTGGATAGTTTCACCTGTTGCGCACTACTCTGTGAAATGGAAGATCCATCATTTTTCGATCGAATGATCAGTCATCTGAGAGCAACTTGCATGCACTATACTGGTTATCCAAAGGACCTTGGACCATCACAGGTTATTCATTTTACCTCCGAGCGTGAGTTTGTCAATCTCCTTCACGAAGGTTTCCCTGTGGTTGTTGCATTTACCATCAGGGGGAACTACACACGGCATCTTGACAAAGTATTAGAAGAATCTGCTGCTGAGTTTTATCCAAATGTAAAATTTATGCGTGTTGAATGTCCAAAATATCCTGGGTTTTGTATAACTCGGCAGAAAAAGGAGTATCCATTTGTTGAGATATTTCACAGTCCAACACATGCAGCTAACCAGGGAAGGGTAGCTGATCCAAACATTACTAAGTACAACGTGAAGGTCTTGCCTTTCAACTACGATGTTAGTGCTTATGGATTTAGAGAATTCTTCAAGCGACATGGTATACGGGCATCAGATCCAAAGTAG
Predicted protein sequences of Glyma03g14760
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma03g14760.1 sequence type=predicted peptide gene model=Glyma03g14760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEDPSFFDRMISHLRATCMHYTGYPKDLGPSQVIHFTSEREFVNLLHEGFPVVVAFTIRGNYTRHLDKVLEESAAEFYPNVKFMRVECPKYPGFCITRQKKEYPFVEIFHSPTHAANQGRVADPNITKYNVKVLPFNYDVSAYGFREFFKRHGIRASDPK*
>Glyma03g14760.2 sequence type=predicted peptide gene model=Glyma03g14760 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLQGLDSFTCCALLCEMEDPSFFDRMISHLRATCMHYTGYPKDLGPSQVIHFTSEREFVNLLHEGFPVVVAFTIRGNYTRHLDKVLEESAAEFYPNVKFMRVECPKYPGFCITRQKKEYPFVEIFHSPTHAANQGRVADPNITKYNVKVLPFNYDVSAYGFREFFKRHGIRASDPK*