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Report for Sequence Feature Glyma03g09110

Feature Type:gene_model
Chromosome:Gm03
Start:10641741
stop:10642343
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma03g09110
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G16850AT Annotation by Michelle Graham. TAIR10: unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:9480699-9481640 FORWARD LENGTH=313 SoyBaseE_val: 9.00E-19ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0005575GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cellular component SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_I1JLI7UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JLI7_SOYBN SoyBaseE_val: 2.00E-123ISS

Expression Patterns of Glyma03g09110
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g09110 not represented in the dataset
Glyma03g09110 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g09110 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.03g063700 Wm82.a2.v1IGC As supplied by JGI

References for Glyma03g09110
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma03g09110
>Glyma03g09110.2   sequence type=CDS   gene model=Glyma03g09110   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGGAAGGGTTATTATGGTGTTATTTCATTTCCCCACTGAAGATTCTGTGGGAATCTCTGAGAATTCTTCAAAGCAACGAGCTAGTTTTTACTTCCATCCTTTATTTCACAATGCTCCCTCTCTCCTTCTTAACTTTCACCCTCGCAATCTCCACCTTCCCCCTCCGATCCCATGTCCTCCACCTTGAGGCCGTCGTGCGCATCACTGCCATGCGCATCGAGGCACGTCACGTTTGGCATGAGTCCTATGACGCCACTGTCTCGCTCCTCTGCATGCGCGCCATCTTCGCCCTCCTCTCTTCCCACCTCTCCCTTGCCGCCGCCATCTCCGCAGTCCATGCCACCTCCTTTGTCGCCCAGGAAAATCCCTCTGCCCTCCATGGCGGCAGCAACTGGAAGCTCCCCGCCGTCACTGTCGTCATCGTCTTTGTGATCCTCATGGCCTTCGCCCTTGTACCACAGGTCCTTGCCGCCGCAATGTTCACTTCGCTGCCGTGGATTCAGATCCTCGTTCGTGCAATTACCTCCGGCGCAAAGGTATATCTGATGACATTGCGGAGCCTTGCTCTCATGGTTTTCATAATCAAAGATAGGGTATGA
Predicted protein sequences of Glyma03g09110
>Glyma03g09110.2   sequence type=predicted peptide   gene model=Glyma03g09110   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLEGLLWCYFISPLKILWESLRILQSNELVFTSILYFTMLPLSFLTFTLAISTFPLRSHVLHLEAVVRITAMRIEARHVWHESYDATVSLLCMRAIFALLSSHLSLAAAISAVHATSFVAQENPSALHGGSNWKLPAVTVVIVFVILMAFALVPQVLAAAMFTSLPWIQILVRAITSGAKVYLMTLRSLALMVFIIKDRV*






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