|
A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G79440 | AT | Annotation by Michelle Graham. TAIR10: aldehyde dehydrogenase 5F1 | chr1:29882525-29887275 REVERSE LENGTH=528 | SoyBase | E_val: 3.00E-35 | ISS |
| GO:0006333 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chromatin assembly or disassembly | SoyBase | N/A | ISS |
| GO:0006540 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glutamate decarboxylation to succinate | SoyBase | N/A | ISS |
| GO:0008152 | GO-bp | Annotation by Michelle Graham. GO Biological Process: metabolic process | SoyBase | N/A | ISS |
| GO:0009408 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to heat | SoyBase | N/A | ISS |
| GO:0009416 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to light stimulus | SoyBase | N/A | ISS |
| GO:0009450 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gamma-aminobutyric acid catabolic process | SoyBase | N/A | ISS |
| GO:0055114 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process | SoyBase | N/A | ISS |
| GO:0072593 | GO-bp | Annotation by Michelle Graham. GO Biological Process: reactive oxygen species metabolic process | SoyBase | N/A | ISS |
| GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
| GO:0005759 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial matrix | SoyBase | N/A | ISS |
| GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
| GO:0009570 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast stroma | SoyBase | N/A | ISS |
| GO:0004028 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: 3-chloroallyl aldehyde dehydrogenase activity | SoyBase | N/A | ISS |
| GO:0004777 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: succinate-semialdehyde dehydrogenase (NAD+) activity | SoyBase | N/A | ISS |
| GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
| GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
| GO:0016620 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | SoyBase | N/A | ISS |
| GO:0051287 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: NAD binding | SoyBase | N/A | ISS |
| PTHR11699 | Panther | ALDEHYDE DEHYDROGENASE-RELATED | JGI | ISS | |
| PTHR11699:SF49 | Panther | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE | JGI | ISS | |
| PF00171 | PFAM | Aldehyde dehydrogenase family | JGI | ISS | |
| UniRef100_B9SUZ1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Succinate semialdehyde dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SUZ1_RICCO | SoyBase | E_val: 1.00E-35 | ISS |
| UniRef100_I1MJE1 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1MJE1_SOYBN | SoyBase | E_val: 6.00E-40 | ISS |
|
Glyma03g06830 not represented in the dataset |
Glyma03g06830 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.03g052700 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma03g06830.1 sequence type=CDS gene model=Glyma03g06830 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TTTGTAGACCAAGTCATGATATCCAAGCCATTGTCTCCTGCTCGGATTCAAACCAATGAAGCATTTGGACCTGTTGCACCCCTTTTGAGATTCAAAACTAAAGAGGAAGCTATCAGAATTGCTAATGACACTAATGCAGGTTTGGGTTCATATGCTCTTGAATATGGACTAGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGTGGTTTTAAACAGTCTGGCCTCGGAAGAGAAGGCTCCAAATATGGGATGGATGAATATTTAGAGCCACTGATTATACTTGTGCAACTTTTGTCTTTTGAAGTTTGTAAAACTGAGTTTGGTTATGGTTTGAAGAATCTAGAAAAGAGGGCATATTTGTGTAGAATTATGTGTGGTGGATGTTTTGGGTCAATGGGTATGGGCTGA
>Glyma03g06830.1 sequence type=predicted peptide gene model=Glyma03g06830 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high FVDQVMISKPLSPARIQTNEAFGPVAPLLRFKTKEEAIRIANDTNAGLGSYALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEPLIILVQLLSFEVCKTEFGYGLKNLEKRAYLCRIMCGGCFGSMGMG*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||