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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma03g03861

Feature Type:gene_model
Chromosome:Gm03
Start:3739483
stop:3743467
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma03g03861
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G18570AT Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein | chr2:8063429-8064841 FORWARD LENGTH=470 SoyBaseE_val: 7.00E-39ISS
GO:0008152GO-bp Annotation by Michelle Graham. GO Biological Process: metabolic process SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0016757GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups SoyBaseN/AISS
GO:0016758GO-mf Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups SoyBaseN/AISS
PTHR11926Panther GLUCOSYL/GLUCURONOSYL TRANSFERASES JGI ISS
PF00201PFAM UDP-glucoronosyl and UDP-glucosyl transferase JGI ISS
UniRef100_I1JKV0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JKV0_SOYBN SoyBaseE_val: 3.00E-109ISS
UniRef100_Q9ZU72UniRef Annotation by Michelle Graham. Most informative UniRef hit: UDP-glycosyltransferase 72D1 n=2 Tax=Arabidopsis thaliana RepID=U72D1_ARATH SoyBaseE_val: 3.00E-36ISS

Expression Patterns of Glyma03g03861
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g03861 not represented in the dataset
Glyma03g03861 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g03861 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma03g03861
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma03g03861
>Glyma03g03861.1   sequence type=CDS   gene model=Glyma03g03861   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CAATACTCAAATAAATTTGTTTGGTCTGTGCGCCCACCTATCACCAAAGCTGGCACCGACAACTATCTCACAACAGGTGAGGAAGGAGAAATCGGAACTACCCTTGGGTCTAATAATGAACCATCAAACTCTTTTCCTGATGAGTTCTACCGCATACAAAACAATGGAATTGTGATCACAAATTGGGCACCACAATTGGATATTTTGAAGCACCCATCTATTGGTGGTTTTGTGTCTCATTGTGGGTGGAACTCACTAATAGAGAGTGTTTCATGTGGGGTGCCAATAATTGGATTGCCTCTTTTTGGAGAGCAAATGATGAATGCCACGATGCGTGTGTCACCATCTACCAACATGGTTGGAAGGGAGGAGTTATCAAAAGCAATAAGGAAGATAATGGATAAGGGTGACAAAGAAGGGAGTGTAATGAGGGAAAGGGCTAAAGAGCTTAAGCACATAGCAAAAAGAGCTTGGTCTCATGATGGTCCTACTTATTTAGCACTTTCAAAAATCACTCACTCAAATGGGGTGTGA
Predicted protein sequences of Glyma03g03861
>Glyma03g03861.1   sequence type=predicted peptide   gene model=Glyma03g03861   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
QYSNKFVWSVRPPITKAGTDNYLTTGEEGEIGTTLGSNNEPSNSFPDEFYRIQNNGIVITNWAPQLDILKHPSIGGFVSHCGWNSLIESVSCGVPIIGLPLFGEQMMNATMRVSPSTNMVGREELSKAIRKIMDKGDKEGSVMRERAKELKHIAKRAWSHDGPTYLALSKITHSNGV*






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