Glyma03g02826 - SoyBase

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Report for Sequence Feature Glyma03g02826

Feature Type:	gene_model
Chromosome:	Gm03
Start:	2655363
stop:	2656234
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma03g02826

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G23090	AT	Annotation by Michelle Graham. TAIR10: sulfate transporter 91 \| chr1:8185238-8188954 REVERSE LENGTH=631	SoyBase	E_val: 1.00E-32	ISS
GO:0006810	GO-bp	Annotation by Michelle Graham. GO Biological Process: transport	SoyBase	N/A	ISS
GO:0008272	GO-bp	Annotation by Michelle Graham. GO Biological Process: sulfate transport	SoyBase	N/A	ISS
GO:0055085	GO-bp	Annotation by Michelle Graham. GO Biological Process: transmembrane transport	SoyBase	N/A	ISS
GO:0016020	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: membrane	SoyBase	N/A	ISS
GO:0016021	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane	SoyBase	N/A	ISS
GO:0005215	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transporter activity	SoyBase	N/A	ISS
GO:0008271	GO-mf	Annotation by Michelle Graham. GO Molecular Function: secondary active sulfate transmembrane transporter activity	SoyBase	N/A	ISS
GO:0015116	GO-mf	Annotation by Michelle Graham. GO Molecular Function: sulfate transmembrane transporter activity	SoyBase	N/A	ISS
PTHR11814	Panther	SULFATE TRANSPORTER	JGI		ISS
PTHR11814:SF46	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00916	PFAM	Sulfate transporter family	JGI		ISS
UniRef100_B9GEK7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=1 Tax=Populus trichocarpa RepID=B9GEK7_POPTR	SoyBase	E_val: 7.00E-31	ISS
UniRef100_I1KM59	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KM59_SOYBN	SoyBase	E_val: 2.00E-41	ISS

Expression Patterns of Glyma03g02826

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma03g02826 not represented in the dataset	Glyma03g02826 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma03g02826 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.03g024700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma03g02826

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma03g02826

Limit To All Plant Sequences

>Glyma03g02826.1   sequence type=CDS   gene model=Glyma03g02826   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCTCACAGAGGAAGTGTCTCCCAGTGAACAACCTGATCTTTTTCTTCAATTAGCTTTAACTTCAACATTCTTTGCTGGGATCTTTCAAGCCGCTCTTGGAATTCTAAGGCTAGGATTTATCATTGATTTTCTATCAAAGGCAATCCTTATTGGATTCATGGTTGGATCAGCTGTAATTGTAGCTTTGCAACAGCTCAAGGGCCTTCATGGAATCAAACATTTCACCAAAAAGATGCAACAGCTCAAGGACTAA

Predicted protein sequences of Glyma03g02826

Limit To All Plant Sequences

>Glyma03g02826.1   sequence type=predicted peptide   gene model=Glyma03g02826   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLTEEVSPSEQPDLFLQLALTSTFFAGIFQAALGILRLGFIIDFLSKAILIGFMVGSAVIVALQQLKGLHGIKHFTKKMQQLKD*

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