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Report for Sequence Feature Glyma02g37933

Feature Type:gene_model
Chromosome:Gm02
Start:43225465
stop:43227156
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g37933
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G34670AT Annotation by Michelle Graham. TAIR10: Protein of unknown function (DUF630 and DUF632) | chr2:14613239-14615231 REVERSE LENGTH=561 SoyBaseE_val: 3.00E-43ISS
GO:0006499GO-bp Annotation by Michelle Graham. GO Biological Process: N-terminal protein myristoylation SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
PTHR21450Panther UNCHARACTERIZED JGI ISS
PF04782PFAM Protein of unknown function (DUF632) JGI ISS
UniRef100_D7LTT2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Proline-rich family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7LTT2_ARALL SoyBaseE_val: 6.00E-13ISS
UniRef100_I1MHT1UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MHT1_SOYBN SoyBaseE_val: 4.00E-126ISS

Expression Patterns of Glyma02g37933
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g37933 not represented in the dataset
Glyma02g37933 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g37933 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g215400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma02g37933
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g37933
>Glyma02g37933.1   sequence type=CDS   gene model=Glyma02g37933   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTTTGTACAGAAAAGAAAATACAGCTATGCCTGTGGCGGTTGGTAGAAGTGGGAAAACATTGGAGGGTATAGGTAAAGAGCTGGATGATCATTTCCTGAAAGCATCTGGATGTATAAAGGAAATTGTTGTTCTTATAGATATCAGTGGAGGAGATACACTTCTACGGCAGAATTCTGGGCATCTTGATAAGAAGAGAGGCGATTCTGCAAAGGTCTTCAGTGTACTATCATGGAGTAGGTATTCAAAATCACCCCCATCCACCAAAGATGGTGCTGAATTTTCTGGTCGTAGGGAACCATGCAAGCCTAGAGCTCATTGTGCCACACTTAAAAAATTATATGCGGCAGAGAAGAAACTTTTCAAGGCATTAAAGGAGGAGGGAGTTGTTGCATTGGAGTTCGACAGGAAGTCCATGTTATTGCGTAAACAAGAGGATGAGAATCTTTACATGGCCAAGATTGACAAAATGCGATCAAGTGTTGATAAGTTGGAGTCCGATTTAATAAGCCTAAGGCAATGCATCAGTGACACAACTTCATCAATTTTGGAAATGATACATGAGGAGCTTTTACCCCAGCTGGTTGCATTAACTGTAGGGTATATTTCTCAGAATTGA
Predicted protein sequences of Glyma02g37933
>Glyma02g37933.1   sequence type=predicted peptide   gene model=Glyma02g37933   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSLYRKENTAMPVAVGRSGKTLEGIGKELDDHFLKASGCIKEIVVLIDISGGDTLLRQNSGHLDKKRGDSAKVFSVLSWSRYSKSPPSTKDGAEFSGRREPCKPRAHCATLKKLYAAEKKLFKALKEEGVVALEFDRKSMLLRKQEDENLYMAKIDKMRSSVDKLESDLISLRQCISDTTSSILEMIHEELLPQLVALTVGYISQN*






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