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Report for Sequence Feature Glyma02g37770

Feature Type:gene_model
Chromosome:Gm02
Start:43103042
stop:43103832
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g37770
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G27650AT Annotation by Michelle Graham. TAIR10: Eukaryotic release factor 1 (eRF1) family protein | chr4:13803459-13807556 REVERSE LENGTH=378 SoyBaseE_val: 3.00E-31ISS
GO:0006415GO-bp Annotation by Michelle Graham. GO Biological Process: translational termination SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003747GO-mf Annotation by Michelle Graham. GO Molecular Function: translation release factor activity SoyBaseN/AISS
PTHR10853Panther PELOTA JGI ISS
PF03464PFAM eRF1 domain 2 JGI ISS
UniRef100_B9RFU5UniRef Annotation by Michelle Graham. Most informative UniRef hit: Pelota, putative n=1 Tax=Ricinus communis RepID=B9RFU5_RICCO SoyBaseE_val: 2.00E-30ISS
UniRef100_I1NIJ9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1NIJ9_SOYBN SoyBaseE_val: 3.00E-32ISS

Expression Patterns of Glyma02g37770
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g37770 not represented in the dataset
Glyma02g37770 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g37770 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma02g37770
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g37770
>Glyma02g37770.1   sequence type=CDS   gene model=Glyma02g37770   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AAGGTTCTAAGAGAAGCTACTAATGGCGGACGGGAAGCAGAACGCGTCAAGCTCAAATTGGAAATTAAAGTCCTCCTCCCTTTTGGACGTTTACAAATATATTGGTTCTACCAATCTTTTCAGGCTTTCTTGAAACATATAGATTTCAACGTGGTTCATTGTGCTGTAATTGCAAGTCCAAGATTTACAAAGGATCAGTTTCACCGTCACTTATTTTTGGAAGCAGAACGAAGAGAGTTGCGACCTATTATTGAAAACAAATCCCGCATCATTCTTGTGCATACAAGTTCAGGATACAAGTATGGTTGCTTTCTTTATTTGCAAGTTCTAGGACTTTACAAAAGCTTTGTTAGATAA
Predicted protein sequences of Glyma02g37770
>Glyma02g37770.1   sequence type=predicted peptide   gene model=Glyma02g37770   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
KVLREATNGGREAERVKLKLEIKVLLPFGRLQIYWFYQSFQAFLKHIDFNVVHCAVIASPRFTKDQFHRHLFLEAERRELRPIIENKSRIILVHTSSGYKYGCFLYLQVLGLYKSFVR*






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