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Integrating Genetics and Genomics to Advance Soybean Research


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Report for Sequence Feature Glyma02g37261

Feature Type:gene_model
Chromosome:Gm02
Start:42590823
stop:42600027
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g37261
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G14095AT Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr2:5932506-5933752 REVERSE LENGTH=234 SoyBaseE_val: 2.00E-11ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
UniRef100_Q9ARH3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Plastid-targeted protein 3 n=1 Tax=Craterostigma plantagineum RepID=Q9ARH3_CRAPL SoyBaseE_val: 1.00E-20ISS
UniRef100_UPI0002337656UniRef Annotation by Michelle Graham. Best UniRef hit: UPI0002337656 related cluster n=1 Tax=unknown RepID=UPI0002337656 SoyBaseE_val: 5.00E-143ISS

Expression Patterns of Glyma02g37261
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g37261 not represented in the dataset
Glyma02g37261 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g37261 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.02g210000 Wm82.a2.v1IGC As supplied by JGI

References for Glyma02g37261
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g37261
>Glyma02g37261.1   sequence type=CDS   gene model=Glyma02g37261   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAATATTGGATTCATTTACATACCGATGGCAAACACAACCTTTATTCAAAAGTCTACTTGCTTAGCCATGGAGACATTATGTCAAGCTTCAAAGGTCGATCATGATCGCCCTATTACAAAATTTCGACTTAACTCCAAAGTCAAATACAATTGCTTCTCTCTTCCAGAACAAAACTTGGGCTTGAGGTTTCAAAAAGACGCCACAAAAAAGATGAGCATGGTTGTCTACGCCAGCATACCTCCAGGAAATTTACCCTCTGCTGATTCTTTTCCTGGTAGCTGGAAAGCTTGGATGATTGGAACAGTAGTCGCTGCACTTCTTTCCTTCACGACGAACAAATGGGGACCTTTGCTACTATTGAAAGAGAAAATTGAGACAACGATAGAGCAAGCAGAACGTGTGGCAGATATAGTAGAAGAAGTGGCCGAGAGGGTTGATAAAATTGCGGAAGGGGCTGCCAAGAATCTTCCCGAAGGAAAACTTCAGGATGTTGCTGAATTTGTTGAAAACGTAGCTGAAAATGTAGACAAGCTCGCCGAAGAAGCAGGGGATCTATTGGAAAAGGTAGAAGACAAGCAAGAGGAAGTGGTTTCATTCTTTGAATCAACCGTTCGTCAACAAAAAAGTAATGACGGGACTACGGCTACAGATTCAAAAGATAAAAAATAG
Predicted protein sequences of Glyma02g37261
>Glyma02g37261.1   sequence type=predicted peptide   gene model=Glyma02g37261   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MNIGFIYIPMANTTFIQKSTCLAMETLCQASKVDHDRPITKFRLNSKVKYNCFSLPEQNLGLRFQKDATKKMSMVVYASIPPGNLPSADSFPGSWKAWMIGTVVAALLSFTTNKWGPLLLLKEKIETTIEQAERVADIVEEVAERVDKIAEGAAKNLPEGKLQDVAEFVENVAENVDKLAEEAGDLLEKVEDKQEEVVSFFESTVRQQKSNDGTTATDSKDKK*






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