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Report for Sequence Feature Glyma02g36640

Feature Type:gene_model
Chromosome:Gm02
Start:42101704
stop:42102435
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g36640
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G28088AT Annotation by Michelle Graham. TAIR10: Low temperature and salt responsive protein family | chr4:13961244-13961560 REVERSE LENGTH=77 SoyBaseE_val: 1.00E-38ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
KOG1773 KOG Stress responsive protein JGI ISS
PTHR21659Panther HYDROPHOBIC PROTEIN RCI2 (LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6)-RELATED JGI ISS
PF01679PFAM Uncharacterized protein family UPF0057 JGI ISS
UniRef100_C6SZC4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6SZC4_SOYBN SoyBaseE_val: 5.00E-45ISS
UniRef100_G7JFL3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Stress-induced hydrophobic peptide n=1 Tax=Medicago truncatula RepID=G7JFL3_MEDTR SoyBaseE_val: 3.00E-41ISS

Expression Patterns of Glyma02g36640
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g36640 not represented in the dataset
Glyma02g36640 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g36640 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma02g36640
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g36640
>Glyma02g36640.1   sequence type=CDS   gene model=Glyma02g36640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCGACACGTTGTGAAATATGCTGCGAGATAATGATCGCGATCTTGATCCCTCCTCTCGGAGTTTGCTTTCGCCACGGTTGTTGCAGCGTCGAATTCATCATCTGCTTGCTCCTCACAATTCTAGGTTATATTCCTGGTATAATCTATGCTCTCTATGCTATTATCTTCGTCGATCGTGACCAGTACTTTGATGAATACAGGCGTCCTCTCTATGCACAATACTGA
Predicted protein sequences of Glyma02g36640
>Glyma02g36640.1   sequence type=predicted peptide   gene model=Glyma02g36640   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYAQY*






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