Report for Sequence Feature Glyma02g36510
Feature Type: gene_model
Chromosome: Gm02
Start: 41991807
stop: 41999656
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma02g36510
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G30935 AT
Annotation by Michelle Graham. TAIR10: WRKY DNA-binding protein 32 | chr4:15051916-15053908 REVERSE LENGTH=466
SoyBase E_val: 3.00E-138 ISS
GO:0006355 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003700 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding transcription factor activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0043565 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sequence-specific DNA binding
SoyBase N/A ISS
PF03106 PFAM
WRKY DNA -binding domain
JGI ISS
UniRef100_G7JGQ2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Transcription factor n=2 Tax=Medicago truncatula RepID=G7JGQ2_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1JGP6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JGP6_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma02g36510
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma02g36510
Paralog Evidence Comments
Glyma17g08170 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma02g36510 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.02g203800 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma02g36510
Coding sequences of Glyma02g36510
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma02g36510.1 sequence type=CDS gene model=Glyma02g36510 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGACCAGCGCCATGGACCCCAACCTCTCCCAGAGTCAGACACCATAGGAAACGATTCTCACCCAAAAACGCAACTCACCAAGGAAACAGAACGAGTTGTGGAATCGCTGTCCGACGCCGAGTCGCGGCACCGCGAGTTACGGAGCTCCGACAAACCTTGTTCGGACTCCAATTTAGAAACCCTAGGCGCTGGTGTTACCTCTTCGGTTGAAACCCTTGCTGTGCAGCATCGGAGTGACGATTTGCAAGGGAGCTCTACTGCTCCGAATTCGGGTGGCAAAGCCGAAAGTAAGGAGACAGTTGAATCTCCTGAAAAGGAAACTATTGAAAGAGGAGCAGTGCAGCCACTCCAAACTCAGACAGAAAATCGGCTTCAGGTGTCTGTGTGTTCAATTCCATTGTCTGATCTATCACCAACTTCTGTTACACAATCTTTATCAATTGTTTCTAGTCCAACCGTACAAAAACAGAAAATATCTACTCCAAAGGTCAATAACACACATGTGCCAGAAGTAGATAGGAAAAATCCTTCTGGTCGCAAAACGTTATCTGCTGTTTCTGTTGCAAGGACATCAGCATCTGACGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATGATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGATCCTCCGCGGAAGACTAATTCCATTAGGGAAAATAAGTTTCTGTCTTCCAGTGAACCTATTGTAGAAAACAGTGTACCGGAGCAGCCTGTCAGAGTTCTGAAGGATGCTGATCCATCCATTTCTTCAAAAGAATCTCTACAAGAAGCACCCTGCAGCAATGATAAGAAACGACAAAATACATCTAATATCAGTGGTAATGATAAAGTTATTTTGAAAGAGGAACATGTAAATGAGCCAGAGCCGAAAAAAAGAATGAAGAAAGGTGACTTAACAGAAATGGATTCTCCAGTAAAACCTGGAAAAAAGCCCAAGTTCGTTGTACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAAGGAAATCCACATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGAAAGCACATTGAGACCGCAGTAGATAACTCAGATGCCGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCAGTCCCCAAGAAACGACATGGGCCACCAAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAACAGTTTGCAGGTGAAGAAACCTGACTCCCCACAAAACAAGAAAATTTCTACTCAATGGTCAGTGGACACCGAAGGAGAACTGACCGGGGAAGCGCTAGAGCTTGGAGGTGAGAAAGCAATGGAGTCAGCTCGAACACTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTAA
Predicted protein sequences of Glyma02g36510
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma02g36510.1 sequence type=predicted peptide gene model=Glyma02g36510 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDQRHGPQPLPESDTIGNDSHPKTQLTKETERVVESLSDAESRHRELRSSDKPCSDSNLETLGAGVTSSVETLAVQHRSDDLQGSSTAPNSGGKAESKETVESPEKETIERGAVQPLQTQTENRLQVSVCSIPLSDLSPTSVTQSLSIVSSPTVQKQKISTPKVNNTHVPEVDRKNPSGRKTLSAVSVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDDSGHVIEIVYKSEHSHDPPRKTNSIRENKFLSSSEPIVENSVPEQPVRVLKDADPSISSKESLQEAPCSNDKKRQNTSNISGNDKVILKEEHVNEPEPKKRMKKGDLTEMDSPVKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQNKKISTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC*