Glyma02g35711 - SoyBase

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Report for Sequence Feature Glyma02g35711

Feature Type:	gene_model
Chromosome:	Gm02
Start:	40893066
stop:	40908079
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g35711

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G28430	AT	Annotation by Michelle Graham. TAIR10: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). \| chr3:10657441-10662404 REVERSE LENGTH=837	SoyBase	E_val: 6.00E-137	ISS
GO:0008150	GO-bp	Annotation by Michelle Graham. GO Biological Process: biological process	SoyBase	N/A	ISS
GO:0003674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: molecular function	SoyBase	N/A	ISS
KOG2219	KOG	Uncharacterized conserved protein	JGI		ISS
PTHR21481	Panther	UNCHARACTERIZED	JGI		ISS
PF09758	PFAM	Uncharacterised conserved protein	JGI		ISS
UniRef100_G7JTB0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: CLEC16A-like protein n=1 Tax=Medicago truncatula RepID=G7JTB0_MEDTR	SoyBase	E_val: 3.00E-136	ISS
UniRef100_I1JGJ4	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JGJ4_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma02g35711

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g35711 not represented in the dataset	Glyma02g35711 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma02g35711

Paralog	Evidence	Comments
Glyma10g09534	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma02g35711 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g198100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g35711

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma02g35711

Limit To All Plant Sequences

>Glyma02g35711.2   sequence type=transcript   gene model=Glyma02g35711   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CGAAAAAGTTAGGAAGCTATGAATCCTCCTTCCACACTCGGGGATGGCCAGTGACACTAATTTTACACACTTTTCTTGCAAAAGACGCAGCTCCAAATGGTTGGTTTAGTCATATTTGAATACTGACTTGTTGAACGGTTGTTGGATGGTTACTGCAACTCACTACCAACTAGCCAAACCAAAATCACCGTCAATTGCACCAATTGTTTTCATTCTACAATGCGTAACACTATCACCGCTTCTTCTAAACGCTCTTCAATCTTCGCATTCCACAGCGACACTTCATCACTCTCTTCATTCTTGTTCCTTCTCTCACCGTCGCCATGTTGCGCTCTCTCTGGCGATCCATCGATCGCTTCTCCGTTCAACACTTCCAATACGTAATCAATGAACTGCGGAAGATCAAAGTTGTGGATGAACATAACAGGGAACTTGTGATGAATTTGTTGCAATCTGTTGTGGAGATTGTTACTTATGGCGATAGACAAGATCCGCACATTTTTGAGTGTTTCATGGAACGGCAAGTGCTGGCAGACTTTGTTCGCATACTTAAGATCAGTCAAGAGTCGAAAATTGACGGACCTCTGCTTCAATATTTGAGCATAATGATTCAAAACATGGATAGTGAACATGCAATTTTTTATTGCTTCAGCAATGGTTATATGAACAACATTATTTTGCATCCCTACAAATTTGATGGGGGAGATCTAGCTCCATACTATGTTTCTTTCCTAAGGGCAATTAGCAATAAAATAAACAAAGACACACTTTGCCTTCTTGTGAATGTTCAGGGGGATGCTGTAGTCTCCTTTCCCTTGTACACTGAAGCTCTAAGATTTGCTCAGCATGAGGAAAAGATGATTCAGACAGCTATACGTGCATTAGTTCTGAACATCTACAATGTTAGTGATGACATGGTCTATCAATTTATATCAACTCCTCCAGTTTCAGAATATTTCTCTGACCTGGTTCGTAGATTAAGCAATCTATGCTTTTGCTTAGATGATTTTGTCTATGATAAAGGGAAAATGGACGCTCAAAAACGAAGAGATGGGGTTATTCTTGAAGCTGACAAAATTGCAGATGAACTGCACTACTTTAAAGACATTCTTAGTGTTGGCGAACCTCGTTTGACTAGACTGGTTACGGAAAATCTTCTGAATGGGCTTGTGTTTCCTCTACTATTCTCATTTATGGCTTCAAAGAATAAAAATGGATCTGATTTGTCTGCTATCACTTCGCTATATATCATATCCTGCCTTCTTCAGGTTGTTGGCGGAAGAAGCATGATTAACAATGTGGCTGGTGTTATCTTGTATCATATTTTGAACTTAAATGTGAGAATTCCAAGTGAAGGGAATGCTTCTGATGTCCATGATGATGTTAAAACTTTTTCAAAGTGCTTGAATGAAGTGGAAAGAGTTATATGTTATGATCCTGAGTCAAATGGATCTGAGAGTATCAATGTAACCTATTTAGGTGCTCATTGGGAAGGTTTCATGTCTAGTTTCAATATTAATAGCTCAAACAGTGAAATTTGTTCCAAAAGGAGTGGAATCTTTGCTTTTGTTTTCTGTGAGGATCAAAGCCTATTGTTAGCTTCAATATTTCTCTTGCTTATTCTGACTGAAAGTAAAGATCTTGATTGTCTCCTATCTTCAATGAGTGGGCTAAGCGAGAAGGAGGATGAGATGTTGCAGACTGATGATACATCAATATCTAAGTCTGTGGATGAAAGTATCTTCATTAGATTTATGCCTGAGATTTTAAATGCCCTGCTGAATGTTTTAGCCTTCCAGCAACCCCTTTCTATAATGATGCTATGGAATGCGGGGTGGTGCTTGCAAAAGCTACTCAACTTCCATAGAGAGGGACTTAATGGTGATAATCTTCTCTTATTCACTACTTCATATGATCAGTCCCGTGTAAACTTTCTGAATGAACTTGGTGGAGTTTGGTTTGATCATATTCCAGATACTCTAATAACAGAATCGGCAAGCTGTGTTAGAGTTCTTGAACAATCTTCCCAATATAAAGATCCATTATTTATGTTGGAGCTTGTTCTTCACCACCAACCCACCAATGGTCAAACATCTTCATATTTTGCTTGGCAAAGGATGGTTGATGCAGTAAAGGCTTTTATTCTCCACTTCCAGTTGAAGACATTTATTTTGAAAGGTGTGTTGGTTGACAAGCCATTATTGAACATGATTTCCAGTTCTACCAATGATTCTAGAGTAATCCGTGCATCAGATGTTTCATCTGCTAGCTTTGGGTCAAATGTTTCATTGGAGTCTGGAATACCATGTGGAATTGCGTTTTCAAATTCTGAAATTAGGGATATATATGTAATACCAGTGGCAAGTGGAATAATTGGAAAATTGCTTCTGGCGGAGAAGCACCCATTCCGCAGTCGACATGGAGTTGTGATTGCCATTGCTCCATTGGCAGGGTTATTTGTACGTCAATATTGCTGTGACTTTTTGTTGCTCAAGAGTGTAGCTTTTATAGTTTTTTATGATGTTAGTCTGATCATTTATGAAAAATAATTATGTGAAGATACTTGCT

Coding sequences of Glyma02g35711

Limit To All Plant Sequences

>Glyma02g35711.1   sequence type=CDS   gene model=Glyma02g35711   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGCGCTCTCTCTGGCGATCCATCGATCGCTTCTCCGTTCAACACTTCCAATACGTAATCAATGAACTGCGGAAGATCAAAGTTGTGGATGAACATAACAGGGAACTTGTGATGAATTTGTTGCAATCTGTTGTGGAGATTGTTACTTATGGCGATAGACAAGATCCGCACATTTTTGAGTGTTTCATGGAACGGCAAGTGCTGGCAGACTTTGTTCGCATACTTAAGATCAGTCAAGAGTCGAAAATTGACGGACCTCTGCTTCAATATTTGAGCATAATGATTCAAAACATGGATAGTGAACATGCAATTTTTTATTGCTTCAGCAATGGTTATATGAACAACATTATTTTGCATCCCTACAAATTTGATGGGGGAGATCTAGCTCCATACTATGTTTCTTTCCTAAGGGCAATTAGCAATAAAATAAACAAAGACACACTTTGCCTTCTTGTGAATGTTCAGGGGGATGCTGTAGTCTCCTTTCCCTTGTACACTGAAGCTCTAAGATTTGCTCAGCATGAGGAAAAGATGATTCAGACAGCTATACGTGCATTAGTTCTGAACATCTACAATGTTAGTGATGACATGGTCTATCAATTTATATCAACTCCTCCAGTTTCAGAATATTTCTCTGACCTGGTTCGTAGATTAAGCAATCTATGCTTTTGCTTAGATGATTTTGTCTATGATAAAGGGAAAATGGACGCTCAAAAACGAAGAGATGGGGTTATTCTTGAAGCTGACAAAATTGCAGATGAACTGCACTACTTTAAAGACATTCTTAGTGTTGGCGAACCTCGTTTGACTAGACTGGTTACGGAAAATCTTCTGAATGGGCTTGTGTTTCCTCTACTATTCTCATTTATGGCTTCAAAGAATAAAAATGGATCTGATTTGTCTGCTATCACTTCGCTATATATCATATCCTGCCTTCTTCAGGTTGTTGGCGGAAGAAGCATGATTAACAATGTGGCTGGTGTTATCTTGTATCATATTTTGAACTTAAATGTGAGAATTCCAAGTGAAGGGAATGCTTCTGATGTCCATGATGATGTTAAAACTTTTTCAAAGTGCTTGAATGAAGTGGAAAGAGTTATATGTTATGATCCTGAGTCAAATGGATCTGAGAGTATCAATGTAACCTATTTAGGTGCTCATTGGGAAGGTTTCATGTCTAGTTTCAATATTAATAGCTCAAACAGTGAAATTTGTTCCAAAAGGAGTGGAATCTTTGCTTTTGTTTTCTGTGAGGATCAAAGCCTATTGTTAGCTTCAATATTTCTCTTGCTTATTCTGACTGAAAGTAAAGATCTTGATTGTCTCCTATCTTCAATGAGTGGGCTAAGCGAGAAGGAGGATGAGATGTTGCAGACTGATGATACATCAATATCTAAGTCTGTGGATGAAAGTATCTTCATTAGATTTATGCCTGAGATTTTAAATGCCCTGCTGAATGTTTTAGCCTTCCAGCAACCCCTTTCTATAATGATGCTATGGAATGCGGGGTGGTGCTTGCAAAAGCTACTCAACTTCCATAGAGAGGGACTTAATGGTGATAATCTTCTCTTATTCACTACTTCATATGATCAGTCCCGTGTAAACTTTCTGAATGAACTTGGTGGAGTTTGGTTTGATCATATTCCAGATACTCTAATAACAGAATCGGCAAGCTGTGTTAGAGTTCTTGAACAATCTTCCCAATATAAAGATCCATTATTTATGTTGGAGCTTGTTCTTCACCACCAACCCACCAATGGTCAAACATCTTCATATTTTGCTTGGCAAAGGATGGTTGATGCAGTAAAGGCTTTTATTCTCCACTTCCAGTTGAAGACATTTATTTTGAAAGGTGTGTTGGTTGACAAGCCATTATTGAACATGATTTCCAGTTCTACCAATGATTCTAGAGTAATCCGTGCATCAGATGTTTCATCTGCTAGCTTTGGGTCAAATGTTTCATTGGAGTCTGGAATACCATGTGGAATTGCGTTTTCAAATTCTGAAATTAGGGATATATATGTAATACCAGTGGCAAGTGGAATAATTGGAAAATTGCTTCTGGCGGAGAAGCACCCATTCCGCAGTCGACATGGAGTTGTGATTGCCATTGCTCCATTGGCAGGGTTATTTCCTAAAATAGATGAGGACCACCCTTCATGGTTGCATCTTCAAATTAGAGAGTTTGACCCACAGTTTTATTCAACCAAAGCCAGAGGAAACCACCTGAGCATGCCTGATCATTTGGCAGATGGGAGATGGACCCTTGGTTTCCCGAATGCAAGAGCTTGTGAGGAAGCTCATTTAGTGATTCTGAATGAAATTACCAAACAGAGATCAGCCGTGGAGTATATGCTTGCTCCATTACTTCAGGATGATCTTGAATTAGCTAAAAGCTGA

>Glyma02g35711.2   sequence type=CDS   gene model=Glyma02g35711   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTTGCGCTCTCTCTGGCGATCCATCGATCGCTTCTCCGTTCAACACTTCCAATACGTAATCAATGAACTGCGGAAGATCAAAGTTGTGGATGAACATAACAGGGAACTTGTGATGAATTTGTTGCAATCTGTTGTGGAGATTGTTACTTATGGCGATAGACAAGATCCGCACATTTTTGAGTGTTTCATGGAACGGCAAGTGCTGGCAGACTTTGTTCGCATACTTAAGATCAGTCAAGAGTCGAAAATTGACGGACCTCTGCTTCAATATTTGAGCATAATGATTCAAAACATGGATAGTGAACATGCAATTTTTTATTGCTTCAGCAATGGTTATATGAACAACATTATTTTGCATCCCTACAAATTTGATGGGGGAGATCTAGCTCCATACTATGTTTCTTTCCTAAGGGCAATTAGCAATAAAATAAACAAAGACACACTTTGCCTTCTTGTGAATGTTCAGGGGGATGCTGTAGTCTCCTTTCCCTTGTACACTGAAGCTCTAAGATTTGCTCAGCATGAGGAAAAGATGATTCAGACAGCTATACGTGCATTAGTTCTGAACATCTACAATGTTAGTGATGACATGGTCTATCAATTTATATCAACTCCTCCAGTTTCAGAATATTTCTCTGACCTGGTTCGTAGATTAAGCAATCTATGCTTTTGCTTAGATGATTTTGTCTATGATAAAGGGAAAATGGACGCTCAAAAACGAAGAGATGGGGTTATTCTTGAAGCTGACAAAATTGCAGATGAACTGCACTACTTTAAAGACATTCTTAGTGTTGGCGAACCTCGTTTGACTAGACTGGTTACGGAAAATCTTCTGAATGGGCTTGTGTTTCCTCTACTATTCTCATTTATGGCTTCAAAGAATAAAAATGGATCTGATTTGTCTGCTATCACTTCGCTATATATCATATCCTGCCTTCTTCAGGTTGTTGGCGGAAGAAGCATGATTAACAATGTGGCTGGTGTTATCTTGTATCATATTTTGAACTTAAATGTGAGAATTCCAAGTGAAGGGAATGCTTCTGATGTCCATGATGATGTTAAAACTTTTTCAAAGTGCTTGAATGAAGTGGAAAGAGTTATATGTTATGATCCTGAGTCAAATGGATCTGAGAGTATCAATGTAACCTATTTAGGTGCTCATTGGGAAGGTTTCATGTCTAGTTTCAATATTAATAGCTCAAACAGTGAAATTTGTTCCAAAAGGAGTGGAATCTTTGCTTTTGTTTTCTGTGAGGATCAAAGCCTATTGTTAGCTTCAATATTTCTCTTGCTTATTCTGACTGAAAGTAAAGATCTTGATTGTCTCCTATCTTCAATGAGTGGGCTAAGCGAGAAGGAGGATGAGATGTTGCAGACTGATGATACATCAATATCTAAGTCTGTGGATGAAAGTATCTTCATTAGATTTATGCCTGAGATTTTAAATGCCCTGCTGAATGTTTTAGCCTTCCAGCAACCCCTTTCTATAATGATGCTATGGAATGCGGGGTGGTGCTTGCAAAAGCTACTCAACTTCCATAGAGAGGGACTTAATGGTGATAATCTTCTCTTATTCACTACTTCATATGATCAGTCCCGTGTAAACTTTCTGAATGAACTTGGTGGAGTTTGGTTTGATCATATTCCAGATACTCTAATAACAGAATCGGCAAGCTGTGTTAGAGTTCTTGAACAATCTTCCCAATATAAAGATCCATTATTTATGTTGGAGCTTGTTCTTCACCACCAACCCACCAATGGTCAAACATCTTCATATTTTGCTTGGCAAAGGATGGTTGATGCAGTAAAGGCTTTTATTCTCCACTTCCAGTTGAAGACATTTATTTTGAAAGGTGTGTTGGTTGACAAGCCATTATTGAACATGATTTCCAGTTCTACCAATGATTCTAGAGTAATCCGTGCATCAGATGTTTCATCTGCTAGCTTTGGGTCAAATGTTTCATTGGAGTCTGGAATACCATGTGGAATTGCGTTTTCAAATTCTGAAATTAGGGATATATATGTAATACCAGTGGCAAGTGGAATAATTGGAAAATTGCTTCTGGCGGAGAAGCACCCATTCCGCAGTCGACATGGAGTTGTGATTGCCATTGCTCCATTGGCAGGGTTATTTGTACGTCAATATTGCTGTGACTTTTTGTTGCTCAAGAGTGTAGCTTTTATAGTTTTTTATGATGTTAGTCTGATCATTTATGAAAAATAA

Predicted protein sequences of Glyma02g35711

Limit To All Plant Sequences

>Glyma02g35711.1   sequence type=predicted peptide   gene model=Glyma02g35711   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLRSLWRSIDRFSVQHFQYVINELRKIKVVDEHNRELVMNLLQSVVEIVTYGDRQDPHIFECFMERQVLADFVRILKISQESKIDGPLLQYLSIMIQNMDSEHAIFYCFSNGYMNNIILHPYKFDGGDLAPYYVSFLRAISNKINKDTLCLLVNVQGDAVVSFPLYTEALRFAQHEEKMIQTAIRALVLNIYNVSDDMVYQFISTPPVSEYFSDLVRRLSNLCFCLDDFVYDKGKMDAQKRRDGVILEADKIADELHYFKDILSVGEPRLTRLVTENLLNGLVFPLLFSFMASKNKNGSDLSAITSLYIISCLLQVVGGRSMINNVAGVILYHILNLNVRIPSEGNASDVHDDVKTFSKCLNEVERVICYDPESNGSESINVTYLGAHWEGFMSSFNINSSNSEICSKRSGIFAFVFCEDQSLLLASIFLLLILTESKDLDCLLSSMSGLSEKEDEMLQTDDTSISKSVDESIFIRFMPEILNALLNVLAFQQPLSIMMLWNAGWCLQKLLNFHREGLNGDNLLLFTTSYDQSRVNFLNELGGVWFDHIPDTLITESASCVRVLEQSSQYKDPLFMLELVLHHQPTNGQTSSYFAWQRMVDAVKAFILHFQLKTFILKGVLVDKPLLNMISSSTNDSRVIRASDVSSASFGSNVSLESGIPCGIAFSNSEIRDIYVIPVASGIIGKLLLAEKHPFRSRHGVVIAIAPLAGLFPKIDEDHPSWLHLQIREFDPQFYSTKARGNHLSMPDHLADGRWTLGFPNARACEEAHLVILNEITKQRSAVEYMLAPLLQDDLELAKS*

>Glyma02g35711.2   sequence type=predicted peptide   gene model=Glyma02g35711   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MLRSLWRSIDRFSVQHFQYVINELRKIKVVDEHNRELVMNLLQSVVEIVTYGDRQDPHIFECFMERQVLADFVRILKISQESKIDGPLLQYLSIMIQNMDSEHAIFYCFSNGYMNNIILHPYKFDGGDLAPYYVSFLRAISNKINKDTLCLLVNVQGDAVVSFPLYTEALRFAQHEEKMIQTAIRALVLNIYNVSDDMVYQFISTPPVSEYFSDLVRRLSNLCFCLDDFVYDKGKMDAQKRRDGVILEADKIADELHYFKDILSVGEPRLTRLVTENLLNGLVFPLLFSFMASKNKNGSDLSAITSLYIISCLLQVVGGRSMINNVAGVILYHILNLNVRIPSEGNASDVHDDVKTFSKCLNEVERVICYDPESNGSESINVTYLGAHWEGFMSSFNINSSNSEICSKRSGIFAFVFCEDQSLLLASIFLLLILTESKDLDCLLSSMSGLSEKEDEMLQTDDTSISKSVDESIFIRFMPEILNALLNVLAFQQPLSIMMLWNAGWCLQKLLNFHREGLNGDNLLLFTTSYDQSRVNFLNELGGVWFDHIPDTLITESASCVRVLEQSSQYKDPLFMLELVLHHQPTNGQTSSYFAWQRMVDAVKAFILHFQLKTFILKGVLVDKPLLNMISSSTNDSRVIRASDVSSASFGSNVSLESGIPCGIAFSNSEIRDIYVIPVASGIIGKLLLAEKHPFRSRHGVVIAIAPLAGLFVRQYCCDFLLLKSVAFIVFYDVSLIIYEK*

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