Glyma02g35570 - SoyBase

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Report for Sequence Feature Glyma02g35570

Feature Type:	gene_model
Chromosome:	Gm02
Start:	40577720
stop:	40579365
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g35570

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_I1JGI5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JGI5_SOYBN	SoyBase	E_val: 1.00E-167	ISS
UniRef100_Q259M7	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: H0723C07.4 protein n=1 Tax=Oryza sativa RepID=Q259M7_ORYSA	SoyBase	E_val: 5.00E-14	ISS

Expression Patterns of Glyma02g35570

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma02g35570

Paralog	Evidence	Comments
Glyma10g09980	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma02g35570 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g197300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g35570

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g35570

Limit To All Plant Sequences

>Glyma02g35570.1   sequence type=CDS   gene model=Glyma02g35570   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGATCGACGGAGGAAGCACGTCGGTCGCCGTCGTGTACTCCGACGGCAGCCGCGAGATCAACGTCGGCACCGTTGCGGTGGACCCCACGCTCAATTTCAAGAGCCTCCTCACGCTCCTCAGCCAGCGGATCGGGATCTCGCCGCACCAGTTCTCCGTCTACCTCGCCGCCGTCGGTACCGACCGCAAGATTCCGGTCACGGCGAAGCTCAATCTCGCCACTGTGCGCCGCGACGGCGCCGCTCACTACTTCTTCGTGAAGCGCTCCAAGCGCAACAAGAAGGCGAACGGAAACGGAAAGGACGCCGCAAAGAAGAATCATCATCATCCTCGGCCGGAGAATGTCATGCTCCTCCGCCGCGCCGCCGCCTCCGCTGTCAGAGATCCGCCGCTTGTGCCGCCGATTCTGAATCCCGCGCAGTACGAGAGAAGGCTGATGACTTTGCAGATCGAGAGACAGTCTTATCTGATGAACATGAAAGTCGGAGTCAACGGCGGCGCCGCTGAAAGAGAATTTTCAAACACCTCCACCGCCGCCGTCACCGCCGCGTGCGACGGATGTTCAAAGGCAAAAATCACCGGAATTAACGGCGGCTTTCACCTCTGCGTGCACGACGCAGTAACGGTAGGGTTCCGGTCACCGGCGGGACCGATTACACGGCCGGCGAAGACCGCCGGCGAAGCCGGCCCTTGA

Predicted protein sequences of Glyma02g35570

Limit To All Plant Sequences

>Glyma02g35570.1   sequence type=predicted peptide   gene model=Glyma02g35570   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MIDGGSTSVAVVYSDGSREINVGTVAVDPTLNFKSLLTLLSQRIGISPHQFSVYLAAVGTDRKIPVTAKLNLATVRRDGAAHYFFVKRSKRNKKANGNGKDAAKKNHHHPRPENVMLLRRAAASAVRDPPLVPPILNPAQYERRLMTLQIERQSYLMNMKVGVNGGAAEREFSNTSTAAVTAACDGCSKAKITGINGGFHLCVHDAVTVGFRSPAGPITRPAKTAGEAGP*

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