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Report for Sequence Feature Glyma02g35270

Feature Type:gene_model
Chromosome:Gm02
Start:40010022
stop:40010362
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma02g35270
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G02890AT Annotation by Michelle Graham. TAIR10: AAA-type ATPase family protein | chr1:645372-651797 REVERSE LENGTH=1246 SoyBaseE_val: 1.00E-16ISS
GO:0009630GO-bp Annotation by Michelle Graham. GO Biological Process: gravitropism SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
GO:0016887GO-mf Annotation by Michelle Graham. GO Molecular Function: ATPase activity SoyBaseN/AISS
GO:0017111GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleoside-triphosphatase activity SoyBaseN/AISS
UniRef100_G7IF85UniRef Annotation by Michelle Graham. Most informative UniRef hit: Katanin p60 ATPase-containing subunit n=1 Tax=Medicago truncatula RepID=G7IF85_MEDTR SoyBaseE_val: 2.00E-14ISS
UniRef100_I1JFI0UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JFI0_SOYBN SoyBaseE_val: 5.00E-17ISS

Expression Patterns of Glyma02g35270
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g35270 not represented in the dataset
Glyma02g35270 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g35270 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma02g35270
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma02g35270
>Glyma02g35270.1   sequence type=CDS   gene model=Glyma02g35270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTCCCGGGGCAAAGTTCTGCTTGCTTTTGAAGATAATAAGGTCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAGGATGATCATGGTTCTGGAGGGGATGATGCAGATAAAGTTGCAATTAATTATATTTTTGAGGTTGTGCCAGTTCTTTACCGGTCCAAAAGATGCCTCTATTCCTGA
Predicted protein sequences of Glyma02g35270
>Glyma02g35270.1   sequence type=predicted peptide   gene model=Glyma02g35270   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MAPGAKFCLLLKIIRSSKIGVRFDKSIPDGNDLGGLCEDDHGSGGDDADKVAINYIFEVVPVLYRSKRCLYS*






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