Glyma02g34773 - SoyBase

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Report for Sequence Feature Glyma02g34773

Feature Type:	gene_model
Chromosome:	Gm02
Start:	39279420
stop:	39280280
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g34773

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF00076	PFAM	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	JGI		ISS
UniRef100_A2Q4W6	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: RNA-binding region RNP-1 (RNA recognition motif) n=1 Tax=Medicago truncatula RepID=A2Q4W6_MEDTR	SoyBase	E_val: 5.00E-09	ISS
UniRef100_UPI0002339E59	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI0002339E59 related cluster n=1 Tax=unknown RepID=UPI0002339E59	SoyBase	E_val: 9.00E-68	ISS

Expression Patterns of Glyma02g34773

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma02g34773 not represented in the dataset	Glyma02g34773 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g34773 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g191700	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g34773

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g34773

Limit To All Plant Sequences

>Glyma02g34773.1   sequence type=CDS   gene model=Glyma02g34773   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CAGCGAGAAATAAGGAAAATAAATTGGAGGGATGCATCTGATGTTCACTCATTCTATTTCACAAGATTTCCTGAAGATATGAATGAAACTAATTTGTGGTACGAGTTTAAAAAATGGGGGGATGTTCGAGAGGTATTCATCGCAAGAAACCGTAATAAGAGGGGCAAGAGATACGGATTTGTAAGATTCAAGGGGGTGAAGGATGTTACTTGGTTGGAGAGAAAGCTGGATAACCTGGTAGTAGGGGGATTAAAGATGCATGTCAATGTATCAAAGCATGGAAGAGAGAGGACATCACATGGAAAAGCTAGTAGAGGACGACGACAGGAAAAGGGACATGGAGCAGCCAACTGGAACACCAAGCAAAGGATGGAAAAAACTTCATATAAGTTGTTAGAAGACACGAACAGTAAAGGTACCCTTGCAGATACGATGGGGAAACAACTCCAACAGATGAAAGAGACAACCTTGTATGTGAAGGTCCTGATGACGGATAGCAAGAACTTGACACGAGGAAGAAATCTCAGAAACCCGAGTCCAACTGGATTTGTATCTTATTCGTCAGTGCAGTTGAACATACCTATGAAAGAAAAAACATGGCTAAATAATACATGGGTGGGAAGATTGAAGAACCTTGCGTTGTTTGATAGAATGGAAGATGATCTCATGTGGAATGGGGGCGACGACATCACGCCAAAGTATATTAGAGATGACATGGTATTGTTAATAGGCCTCACAGAGACCAAAGCTGCACAAATGGTGAAGGAAGCAAATGAGCAAGGCTCATCCTTATTCTACTCGTTGGAAAAGTCGACTCCTCAGCTGAGAACTGGATATCGTCTAGTCTGGCTATTATGCTAG

Predicted protein sequences of Glyma02g34773

Limit To All Plant Sequences

>Glyma02g34773.1   sequence type=predicted peptide   gene model=Glyma02g34773   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
QREIRKINWRDASDVHSFYFTRFPEDMNETNLWYEFKKWGDVREVFIARNRNKRGKRYGFVRFKGVKDVTWLERKLDNLVVGGLKMHVNVSKHGRERTSHGKASRGRRQEKGHGAANWNTKQRMEKTSYKLLEDTNSKGTLADTMGKQLQQMKETTLYVKVLMTDSKNLTRGRNLRNPSPTGFVSYSSVQLNIPMKEKTWLNNTWVGRLKNLALFDRMEDDLMWNGGDDITPKYIRDDMVLLIGLTETKAAQMVKEANEQGSSLFYSLEKSTPQLRTGYRLVWLLC*

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