Glyma02g33910 - SoyBase

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Report for Sequence Feature Glyma02g33910

Feature Type:	gene_model
Chromosome:	Gm02
Start:	37845859
stop:	37846651
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma02g33910

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G25390	AT	Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein \| chr1:8906640-8908800 REVERSE LENGTH=629	SoyBase	E_val: 1.00E-70	ISS
GO:0006468	GO-bp	Annotation by Michelle Graham. GO Biological Process: protein phosphorylation	SoyBase	N/A	ISS
GO:0006865	GO-bp	Annotation by Michelle Graham. GO Biological Process: amino acid transport	SoyBase	N/A	ISS
GO:0009627	GO-bp	Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance	SoyBase	N/A	ISS
GO:0031347	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of defense response	SoyBase	N/A	ISS
GO:0005886	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane	SoyBase	N/A	ISS
GO:0004672	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein kinase activity	SoyBase	N/A	ISS
GO:0004674	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity	SoyBase	N/A	ISS
GO:0005524	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ATP binding	SoyBase	N/A	ISS
GO:0016301	GO-mf	Annotation by Michelle Graham. GO Molecular Function: kinase activity	SoyBase	N/A	ISS
GO:0016772	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups	SoyBase	N/A	ISS
PTHR24420	Panther	FAMILY NOT NAMED	JGI		ISS
PTHR24420:SF426	Panther	SUBFAMILY NOT NAMED	JGI		ISS
PF00069	PFAM	Protein kinase domain	JGI		ISS
UniRef100_G7IC81	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Wall-associated receptor kinase-like protein n=1 Tax=Medicago truncatula RepID=G7IC81_MEDTR	SoyBase	E_val: 3.00E-86	ISS
UniRef100_I1JGC2	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JGC2_SOYBN	SoyBase	E_val: 4.00E-163	ISS

Expression Patterns of Glyma02g33910

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma02g33910 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.02g187900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma02g33910

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma02g33910

Limit To All Plant Sequences

>Glyma02g33910.2   sequence type=CDS   gene model=Glyma02g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACATGGCCTATTCGAATGCAAATTGCCATAGAGACAATTACTACATTGGCCTATCTCCATACTTCTAACATCATCCACCTTTTTTCGGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATTATGTAATTCATGTCTCCATAGCCCCACAAGGGTCTCCGGGGTATCTTGACCCTCAATATTTCCAATTCTATAGGCTCACAGACAAGAGTGATGTGTATAGCTTTGGGGTGGTGCTTATTGAGCTGATATCATCCATGCCAACAGTTGATGCAGCCAGGGAAAGAGATGAAGTTAACTTGGCAAATCTTGTCATGAAAAAGATTCAAAAAGGAAAGCTTAGTGAGCTTGTAGACCCATCCTTTGGGTTTGAGTCAGACCAAGTAGTTAAAAGGATGCTAACTTCAGTAGCAGGGTTGGCCTTTCGGTGTGTGCAACGAGACAATGAATTAAGGCCTTCTATGAATGAAGTTCTGGAAGCACTCAAGAAATTTCAAAATGGGAATTATGAGTCTGAGAATCTAGAGAAAGAAGATGATGATGGTGTTATCTCTTCTACTTCATCCAGCGAAGTACATCCACCTCAACCAGCTTCACAGGACTCGGGTGAAGTTGGAATTTTAATGAATAATAAGCTACCAACTTTACCGAATTCCTTGACTGAGAAACTAGAAAGTGAATCTAACATGCCCAATGCCAGCAAAGATGAAACCAAACATACTACTTGTTTGAATGTCACACACTGA

Predicted protein sequences of Glyma02g33910

Limit To All Plant Sequences

>Glyma02g33910.2   sequence type=predicted peptide   gene model=Glyma02g33910   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTWPIRMQIAIETITTLAYLHTSNIIHLFSVKVADFGLSRLLPNYVIHVSIAPQGSPGYLDPQYFQFYRLTDKSDVYSFGVVLIELISSMPTVDAARERDEVNLANLVMKKIQKGKLSELVDPSFGFESDQVVKRMLTSVAGLAFRCVQRDNELRPSMNEVLEALKKFQNGNYESENLEKEDDDGVISSTSSSEVHPPQPASQDSGEVGILMNNKLPTLPNSLTEKLESESNMPNASKDETKHTTCLNVTH*

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